RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, human

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA1-205	ENST00000409542	DEPTOR	Q8TB45	409 aa		13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	FAM3C	Q92520	227 aa		13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	ZMAT2	Q96NC0	199 aa	Known RBP	13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	TRMT61B	Q9BVS5	477 aa	Known RBP	13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	ZFP14	Q9HCL3	533 aa		13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	TUFT1	Q9NNX1	390 aa		13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	FBXO2	Q9UK22	296 aa	Predicted RBP	13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	GMEB2	Q9UKD1	530 aa		13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	MRPS17	Q9Y2R5	130 aa	Known RBP	13.84	□□□□□ -0.19
CHRNA1-205	ENST00000409542	MEFV	O15553	781 aa	Predicted RBP	13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	HR	O43593	1189 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CHRNB1	P11230	501 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ATF2	P15336	505 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	GDI1	P31150	447 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	NAMPT	P43490	491 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	OSTN	P61366	133 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MRPL58	Q14197	206 aa	Known RBP	13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ECM1	Q16610	540 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	DCAF4L1	Q3SXM0	396 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ATF7IP2	Q5U623	682 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ALKAL1	Q6UXT8	129 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MAMSTR	Q6ZN01	415 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	KRBA2	Q6ZNG9	492 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ERCC4	Q92889	916 aa	Predicted RBP	13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CLIC6	Q96NY7	704 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	NACC1	Q96RE7	527 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CYP4F11	Q9HBI6	524 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	FAM13B	Q9NYF5	915 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CEP72	Q9P209	647 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	IMPACT	Q9P2X3	320 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	HOOK1	Q9UJC3	728 aa	Known RBP	13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	INSL5	Q9Y5Q6	135 aa		13.83	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MAN2B1	O00754	1011 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PRRG1	O14668	218 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	GDF9	O60383	454 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	BMP15	O95972	392 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ELF1	P32519	619 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MCM7	P33993	719 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	GSDMD	P57764	484 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	XKR4	Q5GH76	650 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PRR23B	Q6ZRT6	265 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	GPIHBP1	Q8IV16	184 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TCEAL8	Q8IYN2	117 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CELF5	Q8N6W0	485 aa	Known RBP	13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RSPRY1	Q96DX4	576 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	UROC1	Q96N76	676 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	C2orf42	Q9NWW7	574 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	FBXL5	Q9UKA1	691 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SRPRB	Q9Y5M8	271 aa	Known RBP	13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PIAS3	Q9Y6X2	628 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CHD8	Q9HCK8	2581 aa		13.82	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ARHGEF35	A5YM69	484 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CHURC1-FNTB	B4DL54	471 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ARNTL	O00327	626 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PODXL	O00592	558 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SLC30A4	O14863	429 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TRAPPC3	O43617	180 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RRP9	O43818	475 aa	Known RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PSMC3	P17980	439 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CCNE1	P24864	410 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	FNTB	P49356	437 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LRMP	Q12912	555 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	NCAPH	Q15003	741 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PPM1J	Q5JR12	505 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LAIR1	Q6GTX8	287 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PDZD4	Q76G19	769 aa	Predicted RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	LRRC8A	Q8IWT6	810 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CACTIN	Q8WUQ7	758 aa	Known RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	C18orf25	Q96B23	403 aa	Predicted RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	CDT1	Q9H211	546 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	BRMS1	Q9HCU9	246 aa		13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RBM12	Q9NTZ6	932 aa	Known RBP	13.81	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ZNF197	O14709	1029 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MICAL2	O94851	1124 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RET	P07949	1114 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	MYL4	P12829	197 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RPA1	P27694	616 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	GRM5	P41594	1212 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SOX9	P48436	509 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	NRL	P54845	237 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TWF1	Q12792	350 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ST3GAL2	Q16842	350 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TAS1R3	Q7RTX0	852 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SMARCD2	Q92925	531 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	IRF7	Q92985	503 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	ACO2	Q99798	780 aa	Known RBP	13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	PTPRH	Q9HD43	1115 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TRPV5	Q9NQA5	729 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	SEMA4G	Q9NTN9	838 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RAB23	Q9ULC3	237 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	TNFSF13B	Q9Y275	285 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	RALGAPA1	Q6GYQ0	2036 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	HEPACAM2	A8MVW5	462 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542		K7ESF4	209 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	BIN1	O00499	593 aa		13.8	□□□□□ -0.2
CHRNA1-205	ENST00000409542	VNN2	O95498	520 aa		13.8	□□□□□ -0.2

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