RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 C5orf67F2Z3F1 127 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 EPHB6O15197 1021 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 TACC1O75410 805 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 CYP11A1P05108 521 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 PBX3P40426 434 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 APBA1Q02410 837 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 PTPN21Q16825 1174 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 TTC39CQ8N584 583 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 BCL7CQ8WUZ0 217 aaPredicted RBP21.94■■□□□ 1.1
VSX1-203ENST00000409285 SENP8Q96LD8 212 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 SPG21Q9NZD8 308 aa21.94■■□□□ 1.1
VSX1-203ENST00000409285 NXF1Q9UBU9 619 aaKnown RBP21.94■■□□□ 1.1
VSX1-203ENST00000409285 SYN3O14994 580 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 TADA2AO75478 443 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 CA3P07451 260 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 ODC1P11926 461 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 SMAD3P84022 425 aaKnown RBP21.93■■□□□ 1.1
VSX1-203ENST00000409285 PLCB3Q01970 1234 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 INCA1Q0VD86 236 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 LRMPQ12912 555 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 SOWAHAQ2M3V2 549 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 IQCEQ6IPM2 695 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 FUT10Q6P4F1 479 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 TMEM86AQ8N2M4 240 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 UBR7Q8N806 425 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 HASPINQ8TF76 798 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 TMEM169Q96HH4 297 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 KREMEN1Q96MU8 473 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 UBE2TQ9NPD8 197 aaPredicted RBP21.93■■□□□ 1.1
VSX1-203ENST00000409285 DSEQ9UL01 958 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 MYO6Q9UM54 1294 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 PCDHB8Q9UN66 801 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 YBX2Q9Y2T7 364 aaKnown RBP21.93■■□□□ 1.1
VSX1-203ENST00000409285 FHOD1Q9Y613 1164 aa21.93■■□□□ 1.1
VSX1-203ENST00000409285 HUS1O60921 280 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 GYPCP04921 128 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 MYOGP15173 224 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 TYMPP19971 482 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 BMPR1AP36894 532 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 MFAP3P55082 362 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 APPL2Q8NEU8 664 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 ELMO3Q96BJ8 720 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 ARID3AQ99856 593 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.92■■□□□ 1.1
VSX1-203ENST00000409285 MSRAQ9UJ68 235 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 DNAJC12Q9UKB3 198 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 POLIQ9UNA4 740 aa21.92■■□□□ 1.1
VSX1-203ENST00000409285 NT5C1B-RDH14C9J2C7 533 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 CYB561D2O14569 222 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 CLSTN1O94985 981 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 RB1P06400 928 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 BRCC3P46736 316 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 JAM2P57087 298 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 POLR2FP61218 127 aaKnown RBP21.91■■□□□ 1.1
VSX1-203ENST00000409285 YWHAEP62258 255 aaKnown RBP21.91■■□□□ 1.1
VSX1-203ENST00000409285 TBX2Q13207 712 aaPredicted RBP21.91■■□□□ 1.1
VSX1-203ENST00000409285 GJB7Q6PEY0 223 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 DSTYKQ6XUX3 929 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.91■■□□□ 1.1
VSX1-203ENST00000409285 RRAGAQ7L523 313 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 SHC3Q92529 594 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 STK33Q9BYT3 514 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 SMYD3Q9H7B4 428 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 AJAP1Q9UKB5 411 aaPredicted RBP21.91■■□□□ 1.1
VSX1-203ENST00000409285 L1RE1Q9UN81 338 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 CNTN6Q9UQ52 1028 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 MYH10P35580 1976 aa21.91■■□□□ 1.1
VSX1-203ENST00000409285 GABRDO14764 452 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 ARHGEF15O94989 841 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 ACO1P21399 889 aaKnown RBP21.9■■□□□ 1.1
VSX1-203ENST00000409285 FGFR3P22607 806 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 ERVK-21P61565 698 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 TAP1Q03518 808 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 TMC6Q7Z403 805 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 DDX53Q86TM3 631 aaKnown RBP21.9■■□□□ 1.1
VSX1-203ENST00000409285 GPR65Q8IYL9 337 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 PDCL2Q8N4E4 241 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 KBTBD7Q8WVZ9 684 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 KAT5Q92993 513 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 TGS1Q96RS0 853 aaKnown RBP21.9■■□□□ 1.1
VSX1-203ENST00000409285 MMS19Q96T76 1030 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 VN1R3Q9BXE9 311 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 GPR62Q9BZJ7 368 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 SDCBP2Q9H190 292 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 CAPN11Q9UMQ6 739 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 LZTS1Q9Y250 596 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 F8VZ95 297 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 FGF18O76093 207 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 WARSP23381 471 aaKnown RBP21.9■■□□□ 1.1
VSX1-203ENST00000409285 CTNNB1P35222 781 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 PBX2P40425 430 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 SCARA5Q6ZMJ2 495 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 ADGRF2Q8IZF7 708 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 BAP1Q92560 729 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 ANP32BQ92688 251 aaKnown RBP21.9■■□□□ 1.1
VSX1-203ENST00000409285 GPR88Q9GZN0 384 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 CHST7Q9NS84 486 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 CISHQ9NSE2 258 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 IMPACTQ9P2X3 320 aa21.9■■□□□ 1.1
VSX1-203ENST00000409285 SZT2Q5T011 3432 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms