RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
PTPRN-202ENST00000409251 FESP07332 822 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 EPHB1P54762 984 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 MYL7Q01449 175 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 VGLL4Q14135 290 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 TMEM132BQ14DG7 1078 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 ZDHHC14Q8IZN3 488 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 FAM20AQ96MK3 541 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 TRABDQ9H4I3 376 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 ZNF148Q9UQR1 794 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 SH3BP1Q9Y3L3 701 aa13.7□□□□□ -0.22
PTPRN-202ENST00000409251 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PITPNM2Q9BZ72 1349 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 FZD9O00144 591 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 DDX3YO15523 660 aaKnown RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 CYP26A1O43174 497 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 RNF8O76064 485 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 NEK3P51956 506 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 POLGP54098 1239 aaPredicted RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 TKFCQ3LXA3 575 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PASD1Q8IV76 773 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 RILPQ96NA2 401 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 C10orf88Q9H8K7 445 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 HEY2Q9UBP5 337 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 ANAPC7Q9UJX3 599 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 FAM47DPA6NHR8 397 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 H3BRJ5 948 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 ZSCAN5DPP0CG00 497 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 CD58P19256 250 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 RPA3P35244 121 aaPredicted RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PSMC4P43686 418 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 LVRNQ6Q4G3 990 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 MFN1Q8IWA4 741 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PCMTD2Q9NV79 361 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PSMD10O75832 226 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 TAC1P20366 129 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 CTNNA2P26232 953 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 PDCD2Q16342 344 aaPredicted RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SYT2Q8N9I0 419 aaPredicted RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 ZNF564Q8TBZ8 553 aaPredicted RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 RBM15Q96T37 977 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 CLIC5Q9NZA1 410 aa13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.69□□□□□ -0.22
PTPRN-202ENST00000409251 SMAPO00193 183 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 YBX3P16989 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 CHRNB2P17787 502 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 COG7P83436 770 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 MCL1Q07820 350 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 Q4G0T1 1027 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 ZBED8Q8IZ13 594 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PGAP2Q9UHJ9 254 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 TNS1Q9HBL0 1735 aaKnown RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 HNRNPRO43390 633 aaKnown RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 HAUS5O94927 633 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PGM3O95394 542 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 NR3C2P08235 984 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 VHLP40337 213 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 TTC7BQ86TV6 843 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PIP4K2CQ8TBX8 421 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 CSADQ9Y600 493 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 ATP6V1B1P15313 513 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 MTERF2Q49AM1 385 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 IZUMO3Q5VZ72 239 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 CGB2Q6NT52 195 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 SLC13A5Q86YT5 568 aaPredicted RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 AGGF1Q8N302 714 aaeCLIP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 RBBP8NLQ8NC74 664 aaPredicted RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PRR11Q96HE9 360 aaPredicted RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 THTPAQ9BU02 230 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
PTPRN-202ENST00000409251 PARVGQ9HBI0 331 aa13.68□□□□□ -0.22
PTPRN-202ENST00000409251 A0A1W2PPM1 405 aa13.67□□□□□ -0.22
PTPRN-202ENST00000409251 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
PTPRN-202ENST00000409251 PGM5Q15124 567 aa13.67□□□□□ -0.22
PTPRN-202ENST00000409251 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
PTPRN-202ENST00000409251 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
PTPRN-202ENST00000409251 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms