RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 CAMKK1Q8N5S9 505 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 BPIFB1Q8TDL5 484 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 DDX12PQ92771 950 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 COL26A1Q96A83 441 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 C18orf25Q96B23 403 aaPredicted RBP14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 CCDC94Q9BW85 323 aaPredicted RBP14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 TMEM9BQ9NQ34 198 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 ITPR1Q14643 2758 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 ABCA7Q8IZY2 2146 aa14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 SETXQ7Z333 2677 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-203ENST00000409219 WNT7AO00755 349 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CDX4O14627 284 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 MEFVO15553 781 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 ATG13O75143 517 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 RNF40O75150 1001 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CDC45O75419 566 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 OR4Q2P0C623 313 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 MCM4P33991 863 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 NR5A1Q13285 461 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 PLD1Q13393 1074 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 GPR158Q5T848 1215 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 KIAA1211LQ6NV74 962 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 APPL2Q8NEU8 664 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CNTN3Q9P232 1028 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CACNA1EQ15878 2313 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 GCN1Q92616 2671 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 THADAQ6YHU6 1953 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 ADAMTS20P59510 1910 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 HYAL3O43820 417 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 DTNBO60941 627 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 MED24O75448 989 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 RHOBTB1O94844 696 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 EGFP01133 1207 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 KCNE1P15382 129 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 PSMA5P28066 241 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 GABRR2P28476 465 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 RPL9P32969 192 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 TXKP42681 527 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 MCM2P49736 904 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 EFNA5P52803 228 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 DUSP4Q13115 394 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 PPP2R5AQ15172 486 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 ZNF568Q3ZCX4 644 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 PADI6Q6TGC4 694 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 CATSPER3Q86XQ3 398 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 DEFB124Q8NES8 71 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 TNFRSF25Q93038 417 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 ZNF274Q96GC6 653 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 HPS4Q9NQG7 708 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
CHRNA1-203ENST00000409219 TSC2P49815 1807 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 OTOL1A6NHN0 477 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 PATE3B3GLJ2 98 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TRDMT1O14717 391 aaKnown RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 NEMFO60524 1076 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 CYP11B2P19099 503 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 EPHB3P54753 998 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 CYP4F8P98187 520 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 YWHAHQ04917 246 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 GRSF1Q12849 480 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 RUFY3Q7L099 469 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TMEM130Q8N3G9 435 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TTC9BQ8N6N2 239 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 PSMG2Q969U7 264 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 POLR3CQ9BUI4 534 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 POLD4Q9HCU8 107 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TUFT1Q9NNX1 390 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 KLK13Q9UKR3 277 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TPCN1Q9ULQ1 816 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 NEUROG3Q9Y4Z2 214 aa14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 TIMM13Q9Y5L4 95 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-203ENST00000409219 DENND4CQ5VZ89 1909 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 STK36Q9NRP7 1315 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 SOAT2O75908 522 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 XBP1P17861 261 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 WEE1P30291 646 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 ALDH1A3P47895 512 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 ARHGAP15Q53QZ3 475 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 PMS2CLQ68D20 193 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 MTMR9Q96QG7 549 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 ACO2Q99798 780 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 FAM83CQ9BQN1 747 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 SMG9Q9H0W8 520 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 FBRSL1Q9HCM7 1045 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 PTPRHQ9HD43 1115 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 SLC27A5Q9Y2P5 690 aa14.04□□□□□ -0.16
CHRNA1-203ENST00000409219 PHLPP2Q6ZVD8 1323 aa14.03□□□□□ -0.16
CHRNA1-203ENST00000409219 OBSL1O75147 1896 aa14.03□□□□□ -0.16
CHRNA1-203ENST00000409219 MTMR11A4FU01 709 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms