RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 DCTN2Q13561 401 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 BEST2Q8NFU1 509 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 TMC2Q8TDI7 906 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 USP33Q8TEY7 942 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 MLPHQ9BV36 600 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 THUMPD3Q9BV44 507 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 OSBPL8Q9BZF1 889 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 EIF2AK4Q9P2K8 1649 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PPP1R37O75864 691 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 SEMA3DO95025 777 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 ATP6V1B2P21281 511 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 HOXA13P31271 388 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PHKA1P46020 1223 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 VSNL1P62760 191 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CYP51A1Q16850 503 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CCSAPQ6IQ19 270 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 JADE3Q92613 823 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 C18orf25Q96B23 403 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 RNF26Q9BY78 433 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 MAN1C1Q9NR34 630 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 ING3Q9NXR8 418 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CYP39A1Q9NYL5 469 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 A2ML1A8K2U0 1454 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PSMD3O43242 534 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CNOT3O75175 753 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 BCL10O95999 233 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PSMB9P28065 219 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 HOXC9P31274 260 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CCNA1P78396 465 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 STX4Q12846 297 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CNTN1Q12860 1018 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 ARHGEF6Q15052 776 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 SCARA3Q6AZY7 606 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 HS6ST3Q8IZP7 471 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 EYA1Q99502 592 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PAIP1Q9H074 479 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 INTS2Q9H0H0 1204 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PIDD1Q9HB75 910 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 GALNT8Q9NY28 637 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CTNNAL1Q9UBT7 734 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 WBP11Q9Y2W2 641 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CLRN2A0PK11 232 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CCT8L1PA6NM43 557 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 GDF11O95390 407 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 AVPR1AP37288 418 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 ANKS6Q68DC2 871 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 LRIG3Q6UXM1 1119 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 MACC1Q6ZN28 852 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 SLC44A2Q8IWA5 706 aaPredicted RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 PPP1R14BQ96C90 147 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 CEP44Q9C0F1 390 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 STAP1Q9ULZ2 295 aa8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 ZC3H4Q9UPT8 1303 aaKnown RBP8.23□□□□□ -1.09
RBFOX2-205ENST00000405409 FAM47DPA6NHR8 397 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 USP27XA6NNY8 438 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 EIF3DO15371 548 aaKnown RBP eCLIP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CLDN3O15551 220 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 FAM200BP0CF97 657 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 TPI1P60174 286 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 LINC00301Q8NCQ3 95 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 NSUN7Q8NE18 718 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 RUBCNQ92622 972 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 TFE3P19532 575 aaPredicted RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 VAMP7P51809 220 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 COPAP53621 1224 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ARF3P61204 181 aaPredicted RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 PSMC5P62195 406 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ARF1P84077 181 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 C1DQ13901 141 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CDC73Q6P1J9 531 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CATSPER4Q7RTX7 472 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 SLC25A41Q8N5S1 370 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 SHCBP1LQ9BZQ2 653 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ZNF222Q9UK12 451 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 LOC100653049A0A140TA62 436 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 DENND3A2RUS2 1198 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 KRT34O76011 436 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 AKR1B1P15121 316 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 HOXA7P31268 230 aaPredicted RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 NME5P56597 212 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ACTR2P61160 394 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ABATP80404 500 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 PKN2Q16513 984 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 GPATCH4Q5T3I0 446 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 RESP18Q5W5W9 173 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CYP4Z1Q86W10 505 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 SLC9A7Q96T83 725 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 TMEM79Q9BSE2 394 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 PACSIN1Q9BY11 444 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 C14orf93Q9H972 538 aaKnown RBP8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 ATAD3AQ9NVI7 634 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 TJP2Q9UDY2 1190 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 PCDHB8Q9UN66 801 aa8.22□□□□□ -1.09
RBFOX2-205ENST00000405409 BLMP54132 1417 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms