RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 DSG3P32926 999 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 RANBP1P43487 201 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 PDK4Q16654 411 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 MFSD7Q6UXD7 560 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 MCOLN2Q8IZK6 566 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 HELQQ8TDG4 1101 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 SHC3Q92529 594 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 TEKT1Q969V4 418 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 BICD1Q96G01 975 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FGD4Q96M96 766 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 FAM111AQ96PZ2 611 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 TDRD3Q9H7E2 651 aaKnown RBP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 DCLRE1BQ9H816 532 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMC1B-202ENST00000404354 STOML1Q9UBI4 398 aa10.11□□□□□ -0.79
SMC1B-202ENST00000404354 STK10O94804 968 aaKnown RBP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 PYGLP06737 847 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 TNNI1P19237 187 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ADSSP30520 456 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 USP4Q13107 963 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 PARP6Q2NL67 630 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ANKRD22Q5VYY1 191 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 C3orf62Q6ZUJ4 267 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 RHPN2Q8IUC4 686 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 CFAP61Q8NHU2 1237 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ACCSQ96QU6 501 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 MECRQ9BV79 373 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 RAB20Q9NX57 234 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 UVRAGQ9P2Y5 699 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ZHX2Q9Y6X8 837 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 GSC2O15499 205 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 GRIN3BO60391 1043 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 TROVE2P10155 538 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 MYCLP12524 364 aaPredicted RBP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 VHLP40337 213 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ARFIP2P53365 341 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 XKR9Q5GH70 373 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 CWF19L1Q69YN2 538 aaKnown RBP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 KRT39Q6A163 491 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 TMEM270Q6UE05 265 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 LRRC74BQ6ZQY2 392 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 IL31RAQ8NI17 732 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 DENND1AQ8TEH3 1009 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 KIFAP3Q92845 792 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
SMC1B-202ENST00000404354 GLT8D2Q9H1C3 349 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 ABCA3Q99758 1704 aa10.1□□□□□ -0.79
SMC1B-202ENST00000404354 B2RBV5 119 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 F8VP50 259 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 FAM155BO75949 473 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 KRT1P04264 644 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 SERPINB2P05120 415 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 POLR2MP0CAP2 368 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 CNGA1P29973 690 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 CRKP46108 304 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 GCLCP48506 637 aaPredicted RBP10.09□□□□□ -0.79
SMC1B-202ENST00000404354 ACOT2P49753 483 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 HADHBP55084 474 aaKnown RBP10.09□□□□□ -0.79
SMC1B-202ENST00000404354 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 C12orf50Q8NA57 414 aaPredicted RBP10.09□□□□□ -0.79
SMC1B-202ENST00000404354 FBXL13Q8NEE6 735 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 USP6NLQ92738 828 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 GBP5Q96PP8 586 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TMEM120AQ9BXJ8 343 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 VCXQ9H320 206 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 ZWILCHQ9H900 591 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TUFT1Q9NNX1 390 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TAS2R1Q9NYW7 299 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TCEAL9Q9UHQ7 104 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 MEI4A8MW99 385 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 FESP07332 822 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 MYL2P10916 166 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 PGM1P36871 562 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 SKIV2L2P42285 1042 aaKnown RBP10.09□□□□□ -0.79
SMC1B-202ENST00000404354 ACVR2BQ13705 512 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 UGCGQ16739 394 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TEX9Q8N6V9 391 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 PYROXD1Q8WU10 500 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
SMC1B-202ENST00000404354 THTPAQ9BU02 230 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TEKT3Q9BXF9 490 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 LGALS13Q9UHV8 139 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 CHMP2BQ9UQN3 213 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 TCRBV7S3A2A0A539 114 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 DENND3A2RUS2 1198 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 AHCYL1O43865 530 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 SKIP12755 728 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 ITGB5P18084 799 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 NLRX1Q86UT6 975 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 CTAGE3PQ8IX95 158 aa10.09□□□□□ -0.79
SMC1B-202ENST00000404354 PPFIBP2Q8ND30 876 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms