RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 SUSD3Q96L08 255 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 PNMA5Q96PV4 448 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 MRPL4Q9BYD3 311 aaKnown RBP19.51■□□□□ 0.71
HDAC11-204ENST00000404040 TRPV4Q9HBA0 871 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 KCND2Q9NZV8 630 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 CEP72Q9P209 647 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 ARHGAP28Q9P2N2 729 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 AFF4Q9UHB7 1163 aaKnown RBP19.51■□□□□ 0.71
HDAC11-204ENST00000404040 EML5Q05BV3 1969 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 CHD6Q8TD26 2715 aa19.51■□□□□ 0.71
HDAC11-204ENST00000404040 ATG2BQ96BY7 2078 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 CCDC169A6NNP5 214 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 ARNTLO00327 626 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 ABLIM1O14639 778 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 MEFVO15553 781 aaPredicted RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 MCF2P10911 925 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 PLCG1P19174 1290 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 PROZP22891 400 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 RPL9P32969 192 aaKnown RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 VIPR2P41587 438 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 NPTX2P47972 431 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 PEX3P56589 373 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 TWF1Q12792 350 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 KARSQ15046 597 aaKnown RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 RESP18Q5W5W9 173 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 SHC4Q6S5L8 630 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 TAS1R3Q7RTX0 852 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 DAW1Q8N136 415 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 ZSCAN18Q8TBC5 510 aaPredicted RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 C18orf25Q96B23 403 aaPredicted RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 GBP4Q96PP9 640 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 TIPINQ9BVW5 301 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 TARS2Q9BW92 718 aaKnown RBP19.5■□□□□ 0.71
HDAC11-204ENST00000404040 CUEDC2Q9H467 287 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 TMEM134Q9H6X4 195 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 LMAN1LQ9HAT1 526 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 ASAH2Q9NR71 780 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 MAFFQ9ULX9 164 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 OBSL1O75147 1896 aa19.5■□□□□ 0.71
HDAC11-204ENST00000404040 E9PMD0 336 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 LRP3O75074 770 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 RETP07949 1114 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 CHRNB1P11230 501 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 MYL4P12829 197 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 GJA1P17302 382 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 MCM4P33991 863 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 STAT6P42226 847 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 SATB1Q01826 763 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 DMP1Q13316 513 aaPredicted RBP19.49■□□□□ 0.71
HDAC11-204ENST00000404040 CLEC17AQ6ZS10 378 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 IQUBQ8NA54 791 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 NETO1Q8TDF5 533 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 LARP4BQ92615 738 aaKnown RBP19.49■□□□□ 0.71
HDAC11-204ENST00000404040 CHAMP1Q96JM3 812 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 ZNF512Q96ME7 567 aaPredicted RBP19.49■□□□□ 0.71
HDAC11-204ENST00000404040 ACAP3Q96P50 834 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
HDAC11-204ENST00000404040 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.49■□□□□ 0.71
HDAC11-204ENST00000404040 CEP295Q9C0D2 2601 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 ZNF263O14978 683 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 ADRB1P08588 477 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 CPB1P15086 417 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 CXCL12P48061 93 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 GAS6Q14393 721 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 MPZL3Q6UWV2 235 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 PRR23BQ6ZRT6 265 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 MFSD6LQ8IWD5 586 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 SYT2Q8N9I0 419 aaPredicted RBP19.48■□□□□ 0.71
HDAC11-204ENST00000404040 APPL2Q8NEU8 664 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 SHKBP1Q8TBC3 707 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 RAD54LQ92698 747 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 DDX12PQ92771 950 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 MSANTD3Q96H12 275 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 PLIN2Q99541 437 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 LRRC27Q9C0I9 530 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 MAGEF1Q9HAY2 307 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 USP25Q9UHP3 1055 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 YIPF1Q9Y548 306 aa19.48■□□□□ 0.71
HDAC11-204ENST00000404040 SLC30A4O14863 429 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 HIP1RO75146 1068 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 PLA2G4BP0C869 781 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 CCNE1P24864 410 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 MLLT6P55198 1093 aaPredicted RBP19.47■□□□□ 0.71
HDAC11-204ENST00000404040 MAPK7Q13164 816 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 TEAD2Q15562 447 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 RNF19BQ6ZMZ0 732 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 SPEM1Q8N4L4 309 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 BEST2Q8NFU1 509 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 RSPRY1Q96DX4 576 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 TCHPQ9BT92 498 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 KMT5AQ9NQR1 393 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 KCNG1Q9UIX4 513 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 PCDHB8Q9UN66 801 aa19.47■□□□□ 0.71
HDAC11-204ENST00000404040 SCN1AP35498 2009 aa19.46■□□□□ 0.71
HDAC11-204ENST00000404040 HEPACAM2A8MVW5 462 aa19.46■□□□□ 0.71
HDAC11-204ENST00000404040 PAPSS2O95340 614 aaPredicted RBP19.46■□□□□ 0.71
HDAC11-204ENST00000404040 HARSP12081 509 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms