RNA–Protein interactions for RNA: ENST00000400246.5

DEPDC5-204, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-204ENST00000400246 BATF3Q9NR55 127 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 ZFP69BQ9UJL9 534 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 NUP98P52948 1817 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 CDH16O75309 829 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 ZCCHC18P0CG32 403 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RASSF2P50749 326 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 MFAP3P55082 362 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 SURF1Q15526 300 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 ATP13A4Q4VNC1 1196 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 ZNF341Q9BYN7 854 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 KCNMB3Q9NPA1 279 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 POLLQ9UGP5 575 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 DPPA5A6NC42 116 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 BTNL10A8MVZ5 291 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RTN2O75298 545 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 CETPP11597 493 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 GAP43P17677 238 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RRM1P23921 792 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RFC1P35251 1148 aaPredicted RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RFC5P40937 340 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 BNIP1Q12981 228 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 GPS1Q13098 491 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 PKN2Q16513 984 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TWF2Q6IBS0 349 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 PADI6Q6TGC4 694 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 MTDHQ86UE4 582 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 CEP120Q8N960 986 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 CKAP2Q8WWK9 683 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 WNT8AQ9H1J5 351 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 HOXC10Q9NYD6 342 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 NXF1Q9UBU9 619 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 USH1CQ9Y6N9 552 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 C2orf71A6NGG8 1288 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 FAM47DPA6NHR8 397 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 UBTFL6P0CB48 400 aaPredicted RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 NPEPPSP55786 919 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 SPARCL1Q14515 664 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TBCCQ15814 346 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TAF1BQ53T94 588 aaPredicted RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 RASIP1Q5U651 963 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 APOBEC3FQ8IUX4 373 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TEKT4Q8WW24 435 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 TBC1D10AQ9BXI6 508 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 EBF2Q9HAK2 575 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 SMYD2Q9NRG4 433 aa9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 DIS3Q9Y2L1 958 aaKnown RBP9.93□□□□□ -0.82
DEPDC5-204ENST00000400246 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SGK1O00141 431 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 NVLO15381 856 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 MED7O43513 233 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 NDUFB10O96000 172 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SOX10P56693 466 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 TSPY1Q01534 308 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 TRMT10CQ7L0Y3 403 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 ZNF720Q7Z2F6 126 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 PGBD3Q8N328 593 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 DNAAF3Q8N9W5 541 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 NLRP4Q96MN2 994 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 COL4A1P02462 1669 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 LUC7L3O95232 432 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 KITP10721 976 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SHMT1P34896 483 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 IRX1P78414 480 aaPredicted RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 BBS9Q3SYG4 887 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 RAPH1Q70E73 1250 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 RFX6Q8HWS3 928 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 CFAP61Q8NHU2 1237 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 RPF1Q9H9Y2 349 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 KBTBD13C9JR72 458 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SLC16A3O15427 465 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SLITRK3O94933 977 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 TROVE2P10155 538 aaKnown RBP eCLIP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 ARP10275 920 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 MAGEA4P43358 317 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 OSTNP61366 133 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 PDE1BQ01064 536 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 PTK2BQ14289 1009 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 FASTKD3Q14CZ7 662 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 VEPH1Q14D04 833 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 RCN1Q15293 331 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 MAP3K21Q5TCX8 1036 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 CRELD2Q6UXH1 353 aaPredicted RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 DNAJC9Q8WXX5 260 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 FAM81BQ96LP2 452 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 WRNIP1Q96S55 665 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 COA1Q9GZY4 146 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SNED1Q8TER0 1413 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 GYG2O15488 501 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 MARK3P27448 753 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 THOC5Q13769 683 aaKnown RBP9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SYDE2Q5VT97 1194 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 SLC30A9Q6PML9 568 aa9.92□□□□□ -0.82
DEPDC5-204ENST00000400246 LVRNQ6Q4G3 990 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms