RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ST13P5Q8NFI4 369 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 KRT84Q9NSB2 600 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 PAIP2BQ9ULR5 123 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 MROH7-TTC4A0A0A0MT08 1334 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 RHOBTB1O94844 696 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 DLGAP3O95886 979 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 FDX1P10109 184 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 USP11P51784 963 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ALFQ53S48 1182 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 MCEEQ96PE7 176 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ITIH2P19823 946 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 TMED10P49755 219 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ERFP50548 548 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 CSE1LP55060 971 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SV2CQ496J9 727 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SETD3Q86TU7 594 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 POLBP06746 335 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ARHGAP15Q53QZ3 475 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 ZNF473Q8WTR7 871 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 MRPL48Q96GC5 212 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 STN1Q9H668 368 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 NEU2Q9Y3R4 380 aa12.86□□□□□ -0.35
CACNA1C-219ENST00000399649 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 VWA5AO00534 786 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 CD4P01730 458 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 ALBP02768 609 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 MMP10P09238 476 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 EPHA7Q15375 998 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 HAUS6Q7Z4H7 955 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 E2F8A0AVK6 867 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 NDUFB5O43674 189 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 C10orf88Q9H8K7 445 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 IMPAD1Q9NX62 359 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 MARCOQ9UEW3 520 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 V9GYQ6 96 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 XPO1O14980 1071 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 NMT2O60551 498 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 EYA4O95677 639 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 ACADSBP45954 432 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 POU4F1Q01851 419 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 NECTIN1Q15223 517 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 ARHGEF3Q9NR81 526 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 EIF3LQ9Y262 564 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 FHOD1Q9Y613 1164 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 PDGFRAP16234 1089 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 RRM2P31350 389 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 HARS2P49590 506 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 PWP1Q13610 501 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 ZNF512Q96ME7 567 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 TRPC5OSA6NMA1 111 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 DGKIO75912 1065 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 CHRM3P20309 590 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 HSPA13P48723 471 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 BTKQ06187 659 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 KLC1Q07866 573 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 CYLC2Q14093 348 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 ECSITQ9BQ95 431 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 NMRK1Q9NWW6 199 aa12.85□□□□□ -0.35
CACNA1C-219ENST00000399649 BYSLQ13895 437 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 MGAT5BQ3V5L5 792 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 ZNF438Q7Z4V0 828 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 MICU2Q8IYU8 434 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 PAK5Q9P286 719 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 SNX9Q9Y5X1 595 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
CACNA1C-219ENST00000399649 WEE2P0C1S8 567 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms