RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ALDH2P05091 517 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 MLNP12872 115 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 FASTKD1Q53R41 847 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 PID1Q7Z2X4 250 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 EAF2Q96CJ1 260 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ACSF2Q96CM8 615 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ANAPC7Q9UJX3 599 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ADAM21Q9UKJ8 722 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 PDHXO00330 501 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 TLL1O43897 1013 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 KRT33AO76009 404 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 RNF26Q9BY78 433 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 NOP53Q9NZM5 478 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SAE1Q9UBE0 346 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 TRIM33Q9UPN9 1127 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CCDC78A2IDD5 438 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 RBP5P82980 135 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 NYAP1Q6ZVC0 841 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 GPD1LQ8N335 351 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 FBXO32Q969P5 355 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CYP26B1Q9NR63 512 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CD274Q9NZQ7 290 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 TEX33O43247 280 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 HDLBPQ00341 1268 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CENPUQ71F23 418 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 OMDQ99983 421 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 NOVA2Q9UNW9 492 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 FYNP06241 537 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 CLUP10909 449 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 EFTUD2Q15029 972 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 TMEM260Q9NX78 707 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 GSNP06396 782 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 PDHA1P08559 390 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 YWHABP31946 246 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 TFDP2Q14188 446 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 SGO1Q5FBB7 561 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 COLEC12Q5KU26 742 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 AGAP3Q96P47 875 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 NUDT14O95848 222 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 GRK3P35626 688 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 HERC6Q8IVU3 1022 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 FAM167BQ9BTA0 163 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 HEMGNQ9BXL5 484 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 PARD6BQ9BYG5 372 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 DIABLOQ9NR28 239 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 PCDHA7Q9UN72 937 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 APOBEC2Q9Y235 224 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 PLEKHG2Q9H7P9 1386 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 LRRC14BA6NHZ5 514 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 GYG2O15488 501 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 CDC16Q13042 620 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 IKBKEQ14164 716 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 XXYLT1Q8NBI6 393 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 USP32Q8NFA0 1604 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 CYP7B1O75881 506 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ATP12AP54707 1039 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 RWDD2BP57060 319 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ARF3P61204 181 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
CACNA1C-210ENST00000399606 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms