RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TPCN1Q9ULQ1 816 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 PCDHB8Q9UN66 801 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 CACNA1EQ15878 2313 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 MED24O75448 989 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 OAZ2O95190 189 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 MCM4P33991 863 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 EPHB3P54753 998 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 TMEM196Q5HYL7 178 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 SH3PXD2AQ5TCZ1 1133 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 BPIFB1Q8TDL5 484 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 C18orf25Q96B23 403 aaPredicted RBP19.73■□□□□ 0.75
UFD1-202ENST00000399523 POLR3CQ9BUI4 534 aaPredicted RBP19.73■□□□□ 0.75
UFD1-202ENST00000399523 CRISPLD1Q9H336 500 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 CNTN3Q9P232 1028 aa19.73■□□□□ 0.75
UFD1-202ENST00000399523 BCLAF3A2AJT9 711 aaKnown RBP19.72■□□□□ 0.75
UFD1-202ENST00000399523 K7ERI5 159 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 NEMFO60524 1076 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 CAVIN2O95810 425 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 TOP3BO95985 862 aaKnown RBP19.72■□□□□ 0.75
UFD1-202ENST00000399523 CEACAM1P13688 526 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 CSRP1P21291 193 aaKnown RBP19.72■□□□□ 0.75
UFD1-202ENST00000399523 OSTNP61366 133 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 PTPAQ15257 358 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 FSTL4Q6MZW2 842 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 IFT74Q96LB3 600 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 ACO2Q99798 780 aaKnown RBP19.72■□□□□ 0.75
UFD1-202ENST00000399523 OXCT2Q9BYC2 517 aaPredicted RBP19.72■□□□□ 0.75
UFD1-202ENST00000399523 ASB3Q9Y575 518 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 CYP46A1Q9Y6A2 500 aa19.72■□□□□ 0.75
UFD1-202ENST00000399523 LNP1A1A4G5 178 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 ARHGEF35A5YM69 484 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 WNT7AO00755 349 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 TRDMT1O14717 391 aaKnown RBP19.71■□□□□ 0.75
UFD1-202ENST00000399523 MEFVO15553 781 aaPredicted RBP19.71■□□□□ 0.75
UFD1-202ENST00000399523 RHOBTB1O94844 696 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 PRAMEF12O95522 483 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 FGF19O95750 216 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 MARCKSP29966 332 aaPredicted RBP19.71■□□□□ 0.75
UFD1-202ENST00000399523 KRT2P35908 639 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 RING1Q06587 406 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 SCRN1Q12765 414 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 GRSF1Q12849 480 aaKnown RBP eCLIP19.71■□□□□ 0.75
UFD1-202ENST00000399523 DUSP4Q13115 394 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 ELF2Q15723 593 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 GPR158Q5T848 1215 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 DNAJB7Q7Z6W7 309 aaPredicted RBP19.71■□□□□ 0.75
UFD1-202ENST00000399523 PSMG2Q969U7 264 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 ACAP3Q96P50 834 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 PGLYRP2Q96PD5 576 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 SCNM1Q9BWG6 230 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 ATXN3LQ9H3M9 355 aa19.71■□□□□ 0.75
UFD1-202ENST00000399523 ITPR1Q14643 2758 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 M0QZQ0 153 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 ALDH1A3P47895 512 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
UFD1-202ENST00000399523 CREB5Q02930 508 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 YWHAHQ04917 246 aaPredicted RBP19.7■□□□□ 0.74
UFD1-202ENST00000399523 GPR17Q13304 367 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 ZNF568Q3ZCX4 644 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 CENPPQ6IPU0 288 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 KIFAP3Q92845 792 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 CHFRQ96EP1 664 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 POLD4Q9HCU8 107 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 THG1LQ9NWX6 298 aaKnown RBP19.7■□□□□ 0.74
UFD1-202ENST00000399523 LHX6Q9UPM6 363 aa19.7■□□□□ 0.74
UFD1-202ENST00000399523 SETXQ7Z333 2677 aaKnown RBP19.69■□□□□ 0.74
UFD1-202ENST00000399523 OR4Q2P0C623 313 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 MCF2P10911 925 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 RPA1P27694 616 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 GABRR2P28476 465 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 MCM2P49736 904 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 ARHGAP15Q53QZ3 475 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 FAM83CQ9BQN1 747 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 TMEM60Q9H2L4 133 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 TASP1Q9H6P5 420 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 BRMS1Q9HCU9 246 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 GKN1Q9NS71 199 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 POLR3BQ9NW08 1133 aaPredicted RBP19.69■□□□□ 0.74
UFD1-202ENST00000399523 EBF1Q9UH73 591 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 FREM2Q5SZK8 3169 aa19.69■□□□□ 0.74
UFD1-202ENST00000399523 GON4LQ3T8J9 2241 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 OR6C75A6NL08 312 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 ABLIM1O14639 778 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 DCLK1O15075 740 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 PROZP22891 400 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 KARSQ15046 597 aaKnown RBP19.68■□□□□ 0.74
UFD1-202ENST00000399523 ZCCHC14Q8WYQ9 949 aaKnown RBP19.68■□□□□ 0.74
UFD1-202ENST00000399523 HHIPQ96QV1 700 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 MRPL4Q9BYD3 311 aaKnown RBP19.68■□□□□ 0.74
UFD1-202ENST00000399523 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 TMEM134Q9H6X4 195 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 TMEM9BQ9NQ34 198 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 SLC27A5Q9Y2P5 690 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 PHLPP2Q6ZVD8 1323 aa19.68■□□□□ 0.74
UFD1-202ENST00000399523 GCN1Q92616 2671 aaKnown RBP19.68■□□□□ 0.74
UFD1-202ENST00000399523 OTOL1A6NHN0 477 aaPredicted RBP19.67■□□□□ 0.74
UFD1-202ENST00000399523 CDX4O14627 284 aaPredicted RBP19.67■□□□□ 0.74
UFD1-202ENST00000399523 DTNBO60941 627 aa19.67■□□□□ 0.74
UFD1-202ENST00000399523 RNF40O75150 1001 aa19.67■□□□□ 0.74
UFD1-202ENST00000399523 AARSP49588 968 aaKnown RBP eCLIP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms