RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MAGEA4P43358 317 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 COG2Q14746 738 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 PDK2Q15119 407 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MAPRE1Q15691 268 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 TC2NQ8N9U0 490 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 HIPK4Q8NE63 616 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNB2Q92953 911 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 UNC45AQ9H3U1 944 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 GOLPH3Q9H4A6 298 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SCN3BQ9NY72 215 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 CCT8L1PA6NM43 557 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ANXA9O76027 345 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 TRIM49P0CI25 452 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 TRIM49CP0CI26 452 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MAPTP10636 758 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 RPS12P25398 132 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 RPA1P27694 616 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 GUCY1A3Q02108 690 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MYBPC2Q14324 1141 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KYNUQ16719 465 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 CENPPQ6IPU0 288 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ACAD10Q6JQN1 1059 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 WDR93Q6P2C0 686 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 STOX1Q6ZVD7 989 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 RRM2BQ7LG56 351 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 FEZF2Q8TBJ5 459 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 CELF1Q92879 486 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 TUBGCP4Q9UGJ1 667 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 KANSL1LA0AUZ9 987 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 IQCA1LA6NCM1 817 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 CASP1P29466 404 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 ANXA11P50995 505 aaKnown RBP8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 MTFR1Q15390 333 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 BTNL9Q6UXG8 535 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 SH3KBP1Q96B97 665 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 NT5C1AQ9BXI3 368 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 NIF3L1Q9GZT8 377 aa8.75□□□□□ -1.01
SPTLC3-201ENST00000399002 GLRA3O75311 464 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PCSK1P29120 753 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 STIP1P31948 543 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 GYS2P54840 703 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 FMR1Q06787 632 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CYFIP2Q96F07 1278 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 TEX13BQ9BXU2 312 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 YIPF3Q9GZM5 350 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CARD9Q9H257 536 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 SLCO1B7G3V0H7 640 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 C21orf2O43822 256 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 DAB1O75553 588 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 VHLP40337 213 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 GEMP55040 296 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNK10P57789 538 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CCDC15Q0P6D6 951 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PTGISQ16647 500 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 AARS2Q5JTZ9 985 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 TIGD7Q6NT04 549 aaPredicted RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF746Q6NUN9 644 aaPredicted RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PLD3Q8IV08 490 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 SUGP1Q8IWZ8 645 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 SEPT1Q8WYJ6 367 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ARL8AQ96BM9 186 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 MCEEQ96PE7 176 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CCDC90BQ9GZT6 254 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ADGRA3Q8IWK6 1321 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ESYT3A0FGR9 886 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PP2D1A8MPX8 630 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 CPB1P15086 417 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 GARTP22102 1010 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 NMT1P30419 496 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 SERPINB8P50452 374 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 KPNB1Q14974 876 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 LRRC14Q15048 493 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 TAGAPQ8N103 731 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ARHGEF1Q92888 912 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 DACH2Q96NX9 599 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PARK7Q99497 189 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PRKAA2P54646 552 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 USP10Q14694 798 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PKN3Q6P5Z2 889 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ANKMY2Q8IV38 441 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM162AQ96A26 154 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM32AQ9Y421 112 aaKnown RBP8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PPP1R3GB7ZBB8 358 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 RAD51CO43502 376 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 WEE2P0C1S8 567 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PDGFRAP16234 1089 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 PSMA3P25788 255 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 Q4G0T1 1027 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 RNF149Q8NC42 400 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 ACTRT1Q8TDG2 376 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 RUBCNLQ9H714 662 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 NMRK1Q9NWW6 199 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 GTF3C4Q9UKN8 822 aa8.74□□□□□ -1.01
SPTLC3-201ENST00000399002 INPP5FQ9Y2H2 1132 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms