RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 E2F5Q15329 346 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 ZPBP2Q6X784 338 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 C1orf131Q8NDD1 294 aaKnown RBP11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 LINC01599Q8WXQ3 324 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 SCLT1Q96NL6 688 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 GGA2Q9UJY4 613 aa11.15□□□□□ -0.62
SFTPA1-201ENST00000398636 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 GPR182O15218 404 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 GNA14O95837 355 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 CSF2RAP15509 400 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 RFC2P35250 354 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 MARSP56192 900 aaKnown RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 ARID5AQ03989 594 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 HLTFQ14527 1009 aaKnown RBP eCLIP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 NAB2Q15742 525 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 SNCBQ16143 134 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 KNOP1Q1ED39 458 aaKnown RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 UBXN11Q5T124 520 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 EEF1DP3Q658K8 133 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 CATSPER4Q7RTX7 472 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 TRIM59Q8IWR1 403 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 KIRREL3Q8IZU9 778 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 DBF4BQ8NFT6 615 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 TMEM174Q8WUU8 243 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 RAPGEF5Q92565 580 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 BADQ92934 168 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 SEC16BQ96JE7 1060 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 RNF14Q9UBS8 474 aa11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.15□□□□□ -0.63
SFTPA1-201ENST00000398636 A0A087X0T9 212 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 GOLGA6L7A0A1B0GV03 622 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 FAM228BP0C875 321 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 MYZAPP0CAP1 466 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 SYN1P17600 705 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 SCTRP47872 440 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 SF3A3Q12874 501 aaKnown RBP eCLIP11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 NELFCDQ8IXH7 590 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 DPF3Q92784 378 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 TRAIPQ9BWF2 469 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 AP1M1Q9BXS5 423 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 MRPL4Q9BYD3 311 aaKnown RBP11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 ISCUQ9H1K1 167 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 TMEM206Q9H813 350 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 TMEM59LQ9UK28 342 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 TNFSF13BQ9Y275 285 aa11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.14□□□□□ -0.63
SFTPA1-201ENST00000398636 FAM189A1O60320 539 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 AXLP30530 894 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 NFX1Q12986 1120 aaKnown RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 STRN3Q13033 797 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 SLC18A3Q16572 532 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 STXBP4Q6ZWJ1 553 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 CDR2LQ86X02 465 aaPredicted RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 LUC7LQ9NQ29 371 aaKnown RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 DMAC2Q9NW81 257 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 PCDHGC5Q9Y5F6 944 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 PDXKO00764 312 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 KCNK3O14649 394 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 KIF1CO43896 1103 aaKnown RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 TOM1L1O75674 476 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 ATF7IP2Q5U623 682 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 LRIG3Q6UXM1 1119 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 C12orf56Q8IXR9 622 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 ZC3H3Q8IXZ2 948 aaKnown RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 CRIPAKQ8N1N5 446 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 TMEM199Q8N511 208 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 MDM1Q8TC05 714 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 AGPAT3Q9NRZ7 376 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
SFTPA1-201ENST00000398636 A0A0B4J269 797 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 CCDC189A1A4V9 331 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 CLSTN1O94985 981 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 CTNNA1P35221 906 aaKnown RBP11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 CDR1P51861 262 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 FAM189BP81408 668 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 MCL1Q07820 350 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 ADAM9Q13443 819 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
SFTPA1-201ENST00000398636 NFIL3Q16649 462 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms