RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CCL23P55773 120 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ATP11AP98196 1134 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 NME3Q13232 169 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 BRD3Q15059 726 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 LLGL1Q15334 1064 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 CTXN3Q4LDR2 81 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 TAOK1Q7L7X3 1001 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 RABGGTAQ92696 567 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 A0A0B4J269 797 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SNAI1O95863 264 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SRGAP2BP0DMP2 458 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 EDNRBP24530 442 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 PTPN11Q06124 597 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ACAD10Q6JQN1 1059 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 STKLD1Q8NE28 680 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SLC35G2Q8TBE7 412 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SHISA4Q96DD7 197 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF512Q96ME7 567 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 DPH5Q9H2P9 285 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 FAM114A2Q9NRY5 505 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ABI2Q9NYB9 513 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 GTF3C4Q9UKN8 822 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SLC8A2Q9UPR5 921 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 KPNA7A9QM74 516 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 POLR3GO15318 223 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 B4GALT5O43286 388 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 LSM8O95777 96 aaKnown RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ZBED1O96006 694 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 GZMAP12544 262 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 VEGFBP49765 207 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 BCAT1P54687 386 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 NFIL3Q16649 462 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 CST9Q5W186 159 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SPOPLQ6IQ16 392 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ARHGAP18Q8N392 663 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 UBA3Q8TBC4 463 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 CYFIP2Q96F07 1278 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 UROC1Q96N76 676 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 NTPCRQ9BSD7 190 aaKnown RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 PLEKHA4Q9H4M7 779 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 PTPN22Q9Y2R2 807 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 AP1G2O75843 785 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 C22orf31O95567 290 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 TM4SF4P48230 202 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 COG7P83436 770 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 GUCY2DQ02846 1103 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ITIH3Q06033 890 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 POU5F1BQ06416 359 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 IRF5Q13568 498 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SNX1Q13596 522 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 UAP1Q16222 522 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 EPC2Q52LR7 807 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 EEF1DP3Q658K8 133 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 OVOS1Q6IE37 1185 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 ARHGEF18Q6ZSZ5 1173 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 CTU1Q7Z7A3 348 aaKnown RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 PALM2Q8IXS6 379 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 DDX50Q9BQ39 737 aaKnown RBP8.75□□□□□ -1.01
PTPRD-204ENST00000397606 XPNPEP1Q9NQW7 623 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 RREB1Q92766 1687 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 C2CD2LO14523 706 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 EFCAB14O75071 495 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SGPL1O95470 568 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 MLH1P40692 756 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 RPL10AP62906 217 aaKnown RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PTK7Q13308 1070 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 TSHZ1Q6ZSZ6 1077 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 C1orf131Q8NDD1 294 aaKnown RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 TATDN2Q93075 761 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PPANQ9NQ55 473 aaKnown RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 FAM105AQ9NUU6 356 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SAMD15Q9P1V8 674 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CNTNAP2Q9UHC6 1331 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 H3BRJ5 948 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PODXLO00592 558 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 ADRB2P07550 413 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PNMA6AP0CW24 399 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 ZFXP17010 805 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PHBP35232 272 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 PPP3CAQ08209 521 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 ERCC6LQ2NKX8 1250 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CBWD6Q4V339 395 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CBWD3Q5JTY5 395 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 CBWD5Q5RIA9 395 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 RUFY4Q6ZNE9 571 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF296Q8WUU4 475 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 BSNDQ8WZ55 320 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
PTPRD-204ENST00000397606 KIAA0754O94854 1291 aa8.74□□□□□ -1.01
PTPRD-204ENST00000397606 SCNN1GP51170 649 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms