RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KLHDC7AQ5VTJ3 777 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 FAM171A1Q5VUB5 890 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 DPY19L2P1Q6NXN4 242 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 GJB7Q6PEY0 223 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 RRAGAQ7L523 313 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 APPL2Q8NEU8 664 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 SMYD3Q9H7B4 428 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 UBE2TQ9NPD8 197 aaPredicted RBP25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 PCDHB8Q9UN66 801 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 ARHGEF37A1IGU5 675 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 C5orf67F2Z3F1 127 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 ASPAP45381 313 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 PLCB3Q01970 1234 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 CUL2Q13617 745 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 DDX53Q86TM3 631 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 TOP6BLQ8N6T0 577 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 FAXDC2Q96IV6 333 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 VN1R3Q9BXE9 311 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 CERS4Q9HA82 394 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 L1RE1Q9UN81 338 aa25.29■■□□□ 1.64
TSPAN4-203ENST00000397397 PLXNA4Q9HCM2 1894 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 TBXAS1P24557 533 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 TKTP29401 623 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 RAP1GAPP47736 663 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 SOWAHAQ2M3V2 549 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 DPH6Q7L8W6 267 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 TAS1R1Q7RTX1 841 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 CEP57Q86XR8 500 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 FBXO22Q8NEZ5 403 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 FAM161BQ96MY7 647 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 BCO2Q9BYV7 579 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 GANQ9H2C0 597 aa25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 TIMM13Q9Y5L4 95 aaPredicted RBP25.28■■□□□ 1.64
TSPAN4-203ENST00000397397 EFEMP2O95967 443 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 WEE2P0C1S8 567 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 CDH8P55286 799 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 WSCD1Q658N2 575 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 METTL23Q86XA0 190 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 RNF168Q8IYW5 571 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 ADGRF2Q8IZF7 708 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 PDCL2Q8N4E4 241 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 KAT5Q92993 513 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 MRFAP1L1Q96HT8 127 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 FAM81BQ96LP2 452 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 ARID3AQ99856 593 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 C11orf84Q9BUA3 381 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 HERC2P3Q9BVR0 1158 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 SDCBP2Q9H190 292 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 CYP3A43Q9HB55 503 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 ALG13Q9NP73 1137 aaKnown RBP25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 DNAJC12Q9UKB3 198 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 DSEQ9UL01 958 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 FHOD1Q9Y613 1164 aa25.27■■□□□ 1.64
TSPAN4-203ENST00000397397 VWA8A3KMH1 1905 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 SYN3O14994 580 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 EPHB6O15197 1021 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 NOL4O94818 638 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 ADCY5O95622 1261 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 SOD2P04179 222 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 UCHL3P15374 230 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 TYMPP19971 482 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 FGFR3P22607 806 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 MRE11P49959 708 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 MFAP3P55082 362 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 GCNT1Q02742 428 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 USP41Q3LFD5 358 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 IQCEQ6IPM2 695 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 LIMS2Q7Z4I7 341 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 VSTM4Q8IW00 320 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 TMEM86AQ8N2M4 240 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 ARNTL2Q8WYA1 636 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 B3GALT6Q96L58 329 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 KREMEN1Q96MU8 473 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 MRPL45Q9BRJ2 306 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 TTYH1Q9H313 450 aaPredicted RBP25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 MTMR10Q9NXD2 777 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 STK39Q9UEW8 545 aa25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 PUF60Q9UHX1 559 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 AJAP1Q9UKB5 411 aaPredicted RBP25.26■■□□□ 1.63
TSPAN4-203ENST00000397397 TSC2P49815 1807 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 CYP11A1P05108 521 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 CD58P19256 250 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 TRIM21P19474 475 aaKnown RBP25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 RFX1P22670 979 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 POLR2FP61218 127 aaKnown RBP25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 ARHGAP44Q17R89 818 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 ZNF697Q5TEC3 545 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 ENOSF1Q7L5Y1 443 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 VPS52Q8N1B4 723 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 SPPL3Q8TCT6 385 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 TTPALQ9BTX7 342 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 LZTS1Q9Y250 596 aa25.25■■□□□ 1.63
TSPAN4-203ENST00000397397 ITIH6Q6UXX5 1313 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 TACC1O75410 805 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 FAM163BP0C2L3 166 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 YWHAEP62258 255 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 GPM6BQ13491 265 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 KIAA1841Q6NSI8 718 aa25.24■■□□□ 1.63
TSPAN4-203ENST00000397397 KBTBD7Q8WVZ9 684 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms