RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 NOSTRINQ8IVI9 506 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 TCEAL8Q8IYN2 117 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 HDDC3Q8N4P3 179 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 MCPH1Q8NEM0 835 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 HNRNPABQ99729 332 aaKnown RBP10.35□□□□□ -0.75
NEDD9-203ENST00000397378 GPR88Q9GZN0 384 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 C2orf40Q9H1Z8 148 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 INSL5Q9Y5Q6 135 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 TENM4Q6N022 2769 aa10.35□□□□□ -0.75
NEDD9-203ENST00000397378 ACKR2O00590 384 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 RNF40O75150 1001 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 ENGP17813 658 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 XBP1P17861 261 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 IGFBP6P24592 240 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 CLCNKBP51801 687 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 TNK2Q07912 1038 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 DCAF4L1Q3SXM0 396 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 USP39Q53GS9 565 aaKnown RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 TPSD1Q9BZJ3 242 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 CCDC113Q9H0I3 377 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 TTC12Q9H892 705 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 GPRC5CQ9NQ84 441 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 EVLQ9UI08 416 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 ABCA7Q8IZY2 2146 aa10.34□□□□□ -0.75
NEDD9-203ENST00000397378 ZNF638Q14966 1978 aaKnown RBP10.34□□□□□ -0.75
NEDD9-203ENST00000397378 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 DENND4CQ5VZ89 1909 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 ADAMTS9Q9P2N4 1935 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 PLXNB3Q9ULL4 1909 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 SYN3O14994 580 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 ARHGAP6O43182 974 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 CDKL5O76039 1030 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 SEC24AO95486 1093 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 BCKDHBP21953 392 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 BRCC3P46736 316 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 EPHA5P54756 1037 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 TWF1Q12792 350 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
NEDD9-203ENST00000397378 PTPAQ15257 358 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 ITPRIPL2Q3MIP1 535 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 EARS2Q5JPH6 523 aaKnown RBP10.33□□□□□ -0.76
NEDD9-203ENST00000397378 EEF1DP3Q658K8 133 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 FSTL4Q6MZW2 842 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 CCNI2Q6ZMN8 369 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-203ENST00000397378 ARID3BQ8IVW6 561 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-203ENST00000397378 GTPBP2Q9BX10 602 aaKnown RBP10.33□□□□□ -0.76
NEDD9-203ENST00000397378 EBF1Q9UH73 591 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 MAFFQ9ULX9 164 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 GDAQ9Y2T3 454 aa10.33□□□□□ -0.76
NEDD9-203ENST00000397378 MYH11P35749 1972 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ACACAQ13085 2346 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 UPK3BL1B0FP48 263 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 UPK3BL2E5RIL1 263 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 H7C4K7 107 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 I3L4J1 428 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ATXN7O15265 892 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-203ENST00000397378 EGFP01133 1207 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 EDN1P05305 212 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 NAMPTP43490 491 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 IRX6P78412 446 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-203ENST00000397378 STK3Q13188 491 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 DMC1Q14565 340 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 CALCRLQ16602 461 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 XKR4Q5GH76 650 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 TMEM196Q5HYL7 178 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 GLRA4Q5JXX5 417 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ARMCX6Q7L4S7 300 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 PNPLA1Q8N8W4 532 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 RPLP0P6Q8NHW5 317 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ADAMTS14Q8WXS8 1223 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 YTHDC1Q96MU7 727 aaKnown RBP10.32□□□□□ -0.76
NEDD9-203ENST00000397378 GOLGA2P5Q9HBQ8 144 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 TUFT1Q9NNX1 390 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 CEP72Q9P209 647 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 MBD1Q9UIS9 605 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-203ENST00000397378 CYP46A1Q9Y6A2 500 aa10.32□□□□□ -0.76
NEDD9-203ENST00000397378 ATXN2Q99700 1313 aaKnown RBP10.32□□□□□ -0.76
NEDD9-203ENST00000397378 A0A087WWV3 80 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms