RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GGA2Q9UJY4 613 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 ZNF510Q9Y2H8 683 aa8.87□□□□□ -0.99
NDE1-202ENST00000396355 LINC00854A0A1B0GVQ3 168 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CCRL2O00421 344 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TNPO2O14787 897 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 NKRFO15226 690 aaKnown RBP eCLIP8.86□□□□□ -0.99
NDE1-202ENST00000396355 ASLP04424 464 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 FECHP22830 423 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 MAP4P27816 1152 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 NR1D2Q14995 579 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TMEM63BQ5T3F8 832 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 C6orf89Q6UWU4 347 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CAVIN3Q969G5 261 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TTC17Q96AE7 1141 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CCDC138Q96M89 665 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 DENND2DQ9H6A0 471 aaPredicted RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 DDX60LQ5H9U9 1706 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 GABBR2O75899 941 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 NEK3P51956 506 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 VCPP55072 806 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 PICALMQ13492 652 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 SEL1L2Q5TEA6 688 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 EGFLAMQ63HQ2 1017 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TTC30BQ8N4P2 665 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 SLC44A5Q8NCS7 719 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 LSM14BQ9BX40 385 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 ZNF287Q9HBT7 754 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 SAP30BPQ9UHR5 308 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 TEKT2Q9UIF3 430 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 COQ6Q9Y2Z9 468 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 ATXN2Q99700 1313 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 GOLGA8QA0A0J9YX86 632 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 E9PMD0 336 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 I3L4J1 428 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 ASAP2O43150 1006 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CHMP2AO43633 222 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 SERPINI2O75830 405 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CALM1P0DP23 149 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CALM2P0DP24 149 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CALM3P0DP25 149 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 BCRP11274 1271 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 PRKACBP22694 351 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 AKR1D1P51857 326 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 ERVK-9P63128 1117 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 MTM1Q13496 603 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 FXNQ16595 210 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CEP55Q53EZ4 464 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 ERMARDQ5T6L9 678 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 LRIG3Q6UXM1 1119 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CTU1Q7Z7A3 348 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 NELFCDQ8IXH7 590 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 SCAIQ8N9R8 606 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 PYDC1Q8WXC3 89 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 DHX36Q9H2U1 1008 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 BMP2KQ9NSY1 1161 aaPredicted RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 RCCD1A6NED2 376 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 FBP2O00757 339 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TMCC2O75069 709 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 USP12O75317 370 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 UNC5CO95185 931 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 IFNB1P01574 187 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 PCP11498 1178 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 HARSP12081 509 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 IL4RP24394 825 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 PRCPP42785 496 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 AMPD2Q01433 879 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 OCA2Q04671 838 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 LPIN1Q14693 890 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 TRMT10CQ7L0Y3 403 aaKnown RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 CLVS1Q8IUQ0 354 aaPredicted RBP8.86□□□□□ -0.99
NDE1-202ENST00000396355 FAM9CQ8IZT9 166 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 POU5F2Q8N7G0 328 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 NLRP7Q8WX94 980 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CCSER1Q9C0I3 900 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 CPVLQ9H3G5 476 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 C10orf88Q9H8K7 445 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 COQ3Q9NZJ6 369 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
NDE1-202ENST00000396355 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 LRRC53A6NM62 1247 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 MATN2O00339 956 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 STRNO43815 780 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 MAGP20916 626 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 USP11P51784 963 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 TUBA1BP68363 451 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 DAB2P98082 770 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 TUBA1AQ71U36 451 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 C11orf74Q86VG3 221 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 MAML3Q96JK9 1138 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 KLF6Q99612 283 aaPredicted RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 MAD2L2Q9UI95 211 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms