RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 DYRK4Q9NR20 520 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 EHD2Q9NZN4 543 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 KRT16P08779 473 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 PDGFRBP09619 1106 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 RBP3P10745 1247 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 CNGA3Q16281 694 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ERP27Q96DN0 273 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 IL25Q9H293 177 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 MTSS1O43312 755 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 GTF2H1P32780 548 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ZC3H12BQ5HYM0 836 aaKnown RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 PPIL6Q8IXY8 311 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 RAB42Q8N4Z0 105 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 CMTM5Q96DZ9 223 aa18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ZC3H4Q9UPT8 1303 aaKnown RBP18.16■□□□□ 0.5
UBFD1-201ENST00000395878 ATMINO43313 823 aaPredicted RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 MAP3K10Q02779 954 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 GRIN1Q05586 938 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 RRM2BQ7LG56 351 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 USP33Q8TEY7 942 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 OTUB1Q96FW1 271 aaPredicted RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 CELF4Q9BZC1 486 aaKnown RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 GRID1Q9ULK0 1009 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 DYNC1LI2O43237 492 aaPredicted RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 HBP1O60381 514 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 GPRASP2Q96D09 838 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 AGPAT3Q9NRZ7 376 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 MAN1A2O60476 641 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 SUPT3HO75486 399 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 NDUFS3O75489 264 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 CYP11B2P19099 503 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 PCSK1P29120 753 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 SNX17Q15036 470 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 PATL1Q86TB9 770 aaKnown RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 TPCN2Q8NHX9 752 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 LSM7Q9UK45 103 aaKnown RBP18.15■□□□□ 0.5
UBFD1-201ENST00000395878 PTPAQ15257 358 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 VPS72Q15906 364 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 MDH1BQ5I0G3 518 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 CYFIP2Q96F07 1278 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 DNAJC7Q99615 494 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 PKD2L2Q9NZM6 624 aa18.15■□□□□ 0.5
UBFD1-201ENST00000395878 MED21Q13503 144 aa18.14■□□□□ 0.5
UBFD1-201ENST00000395878 PDIA6Q15084 440 aa18.14■□□□□ 0.5
UBFD1-201ENST00000395878 BARGINQ6ZT62 677 aa18.14■□□□□ 0.5
UBFD1-201ENST00000395878 VPS33BQ9H267 617 aa18.14■□□□□ 0.5
UBFD1-201ENST00000395878 CATSPERBQ9H7T0 1116 aa18.14■□□□□ 0.5
UBFD1-201ENST00000395878 KRT72Q14CN4 511 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 COBLL1Q53SF7 1204 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 ACAD10Q6JQN1 1059 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 DDX42Q86XP3 938 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBFD1-201ENST00000395878 SLC13A5Q86YT5 568 aaPredicted RBP18.14■□□□□ 0.49
UBFD1-201ENST00000395878 PCYOX1LQ8NBM8 494 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 NEUROG2Q9H2A3 272 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 C20orf96Q9NUD7 363 aaPredicted RBP18.14■□□□□ 0.49
UBFD1-201ENST00000395878 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.14■□□□□ 0.494e-8■□□□□ 9.5
UBFD1-201ENST00000395878 MARCOQ9UEW3 520 aaPredicted RBP18.14■□□□□ 0.49
UBFD1-201ENST00000395878 SUFUQ9UMX1 484 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 TADA2AO75478 443 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 SNAPC2Q13487 334 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 NBPF20Q3BBV1 942 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 KCNB2Q92953 911 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 PABPC5Q96DU9 382 aaKnown RBP18.14■□□□□ 0.49
UBFD1-201ENST00000395878 PPP1R36Q96LQ0 422 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 FAM49BQ9NUQ9 324 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 TBX20Q9UMR3 447 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 A0A0G2JLW4 131 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 GRAP2O75791 330 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 IRAK1P51617 712 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 TEKT4Q8WW24 435 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 SLC30A1Q9Y6M5 507 aa18.14■□□□□ 0.49
UBFD1-201ENST00000395878 FAM107AO95990 144 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 ENO3P13929 434 aaPredicted RBP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 KCNJ1P48048 391 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 LVRNQ6Q4G3 990 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 MOXD1Q6UVY6 613 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 DTX3LQ8TDB6 740 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 TMA16Q96EY4 203 aaKnown RBP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 IL17RAQ96F46 866 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 SPATA17Q96L03 361 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 CDYLQ9Y232 598 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 MSH4O15457 936 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 GRB10Q13322 594 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 SETD3Q86TU7 594 aaPredicted RBP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 REXO1L1PQ8IX06 675 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 SERPINB12Q96P63 405 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 ZSWIM1Q9BR11 485 aa18.13■□□□□ 0.49
UBFD1-201ENST00000395878 GTPBP10A4D1E9 387 aaKnown RBP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 PRPF4O43172 522 aaKnown RBP eCLIP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 SRP72O76094 671 aaKnown RBP18.13■□□□□ 0.49
UBFD1-201ENST00000395878 ITGA4P13612 1032 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms