RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NXF1Q9UBU9 619 aaKnown RBP26.22■■□□□ 1.79
CTF1-202ENST00000395019 POLIQ9UNA4 740 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 JRKLQ9Y4A0 524 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 PCDHGC5Q9Y5F6 944 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 NCANO14594 1321 aa26.22■■□□□ 1.79
CTF1-202ENST00000395019 CAPN15O75808 1086 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 FTLP02792 175 aaPredicted RBP26.21■■□□□ 1.79
CTF1-202ENST00000395019 KCNE1P15382 129 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 WDR72Q3MJ13 1102 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 PAPD7Q5XG87 772 aaKnown RBP26.21■■□□□ 1.79
CTF1-202ENST00000395019 DEFB128Q7Z7B8 93 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 HPDLQ96IR7 371 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 RNF39Q9H2S5 420 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 PARP2Q9UGN5 583 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 UBQLN1Q9UMX0 589 aaKnown RBP26.21■■□□□ 1.79
CTF1-202ENST00000395019 MICAL3Q7RTP6 2002 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 SLU7O95391 586 aaKnown RBP26.21■■□□□ 1.79
CTF1-202ENST00000395019 P4HA1P13674 534 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 CSF2RAP15509 400 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 GNA15P30679 374 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 AMPD2Q01433 879 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 CYP3A43Q9HB55 503 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 CDC23Q9UJX2 597 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 SQORQ9Y6N5 450 aa26.21■■□□□ 1.79
CTF1-202ENST00000395019 UQCRHLA0A096LP55 91 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 CALCAP01258 141 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 ATP1A1P05023 1023 aaKnown RBP26.2■■□□□ 1.78
CTF1-202ENST00000395019 UQCRHP07919 91 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 WEE2P0C1S8 567 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 PAK2Q13177 524 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 CLEC16AQ2KHT3 1053 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 SCARA5Q6ZMJ2 495 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 RFFLQ8WZ73 363 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 BADQ92934 168 aa26.2■■□□□ 1.78
CTF1-202ENST00000395019 LAMA2P24043 3122 aaKnown RBP26.2■■□□□ 1.78
CTF1-202ENST00000395019 SMIM28A0A1B0GU29 152 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 ENC1O14682 589 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 MGEA5O60502 916 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 CD58P19256 250 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 MFSD5Q6N075 450 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 THAP2Q9H0W7 228 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 FAM124BQ9H5Z6 455 aaPredicted RBP26.19■■□□□ 1.78
CTF1-202ENST00000395019 FAM105AQ9NUU6 356 aa26.19■■□□□ 1.78
CTF1-202ENST00000395019 XPOTO43592 962 aaKnown RBP26.18■■□□□ 1.78
CTF1-202ENST00000395019 CXCL10P02778 98 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 ABCB4P21439 1286 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 NOP2P46087 812 aaKnown RBP26.18■■□□□ 1.78
CTF1-202ENST00000395019 TCEAL1Q15170 157 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 PLEKHG4Q58EX7 1191 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 ACAD10Q6JQN1 1059 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 TRIM72Q6ZMU5 477 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 HACE1Q8IYU2 909 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 USP38Q8NB14 1042 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 DBF4BQ8NFT6 615 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 KLK14Q9P0G3 267 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 PRKAG2Q9UGJ0 569 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 TUBGCP4Q9UGJ1 667 aa26.18■■□□□ 1.78
CTF1-202ENST00000395019 GRID2IPA4D2P6 1211 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 PALMO75781 387 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 CYP1A1P04798 512 aaPredicted RBP26.17■■□□□ 1.78
CTF1-202ENST00000395019 UNGP13051 313 aaPredicted RBP26.17■■□□□ 1.78
CTF1-202ENST00000395019 ZSCAN20P17040 1043 aaPredicted RBP26.17■■□□□ 1.78
CTF1-202ENST00000395019 MYO1EQ12965 1108 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 GLRA4Q5JXX5 417 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 LRRC52Q8N7C0 313 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 TPCN2Q8NHX9 752 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 C18orf25Q96B23 403 aaPredicted RBP26.17■■□□□ 1.78
CTF1-202ENST00000395019 TRAIPQ9BWF2 469 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 SDCBP2Q9H190 292 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 TRIP11Q15643 1979 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 CTIFO43310 598 aaKnown RBP26.17■■□□□ 1.78
CTF1-202ENST00000395019 CYP3A5P20815 502 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 GPC5P78333 572 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 LINC01599Q8WXQ3 324 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 ARHGEF26Q96DR7 871 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 SMYD3Q9H7B4 428 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 SAR1BQ9Y6B6 198 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 PTPRSQ13332 1948 aa26.17■■□□□ 1.78
CTF1-202ENST00000395019 PDCD11Q14690 1871 aaKnown RBP26.16■■□□□ 1.78
CTF1-202ENST00000395019 THAP12O43422 761 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 ACRP10323 421 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 DSC3Q14574 896 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 RHOT2Q8IXI1 618 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 SLC35G2Q8TBE7 412 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 ZNF606Q8WXB4 792 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 CALR3Q96L12 384 aaKnown RBP26.16■■□□□ 1.78
CTF1-202ENST00000395019 PDCL3Q9H2J4 239 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 CEP290O15078 2479 aa26.16■■□□□ 1.78
CTF1-202ENST00000395019 RAP1GAPP47736 663 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 EPHB4P54760 987 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 CDH8P55286 799 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 TNNC1P63316 161 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 C9orf57Q5W0N0 161 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 MRPL10Q7Z7H8 261 aaKnown RBP26.15■■□□□ 1.78
CTF1-202ENST00000395019 RTN4RL1Q86UN2 441 aaPredicted RBP26.15■■□□□ 1.78
CTF1-202ENST00000395019 TTC39CQ8N584 583 aa26.15■■□□□ 1.78
CTF1-202ENST00000395019 ITGA4P13612 1032 aa26.14■■□□□ 1.78
CTF1-202ENST00000395019 PRLRP16471 622 aa26.14■■□□□ 1.78
CTF1-202ENST00000395019 HADHBP55084 474 aaKnown RBP26.14■■□□□ 1.78
CTF1-202ENST00000395019 WHAMMP3Q1A5X7 153 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms