RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PCDHGC3Q9UN70 934 aa10.92□□□□□ -0.66
HIF1A-203ENST00000394997 C22orf31O95567 290 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 HIC1Q14526 733 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CELF3Q5SZQ8 465 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 ARTNQ5T4W7 220 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 LDLRAD1Q5T700 205 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 MOB2Q70IA6 237 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PLPPR4Q7Z2D5 763 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 TARS2Q9BW92 718 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 TMEM191CA6NGB0 347 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 GJB6O95452 261 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 GJB1P08034 283 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PFKMP08237 780 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 MYBL1P10243 752 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 TMOD1P28289 359 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CDC25CP30307 473 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 DR1Q01658 176 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PTK6Q13882 451 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 FAM187BQ17R55 369 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 SEZ6Q53EL9 994 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 MFSD5Q6N075 450 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 RUFY4Q6ZNE9 571 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PGM2Q96G03 612 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 SEMA4AQ9H3S1 761 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PLAC1Q9HBJ0 212 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 SLC40A1Q9NP59 571 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CAND2O75155 1236 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 TCEA3O75764 348 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CHRNA3P32297 505 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 MDH1P40925 334 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 RPL7AP62424 266 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 ARHGAP1Q07960 439 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 OASLQ15646 514 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CCDC125Q86Z20 511 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CCDC13Q8IYE1 715 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 LMBR1Q8WVP7 490 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 CCDC127Q96BQ5 260 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 ADAM33Q9BZ11 813 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 DCLK3Q9C098 648 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PABPC3Q9H361 631 aaKnown RBP10.91□□□□□ -0.66
HIF1A-203ENST00000394997 VRTNQ9H8Y1 702 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
HIF1A-203ENST00000394997 RIPK2O43353 540 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 SORBS3O60504 671 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 ENDOD1O94919 500 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 SATB1Q01826 763 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 CCDC6Q16204 474 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 ZNF792Q3KQV3 632 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 MIS18BP1Q6P0N0 1132 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 LIMS2Q7Z4I7 341 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 KATNAL2Q8IYT4 538 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 PPM1KQ8N3J5 372 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 VCPIP1Q96JH7 1222 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 CDHR1Q96JP9 859 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 AGO2Q9UKV8 859 aaKnown RBP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 PPME1Q9Y570 386 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 HMGB1P1B2RPK0 211 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 PROSCO94903 275 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 TGFB3P10600 412 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 RFC5P40937 340 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 LACTBP83111 547 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 MPP2Q14168 576 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 STXBP2Q15833 593 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 CGB2Q6NT52 195 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 OTUD6AQ7L8S5 288 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 TRIM50Q86XT4 487 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 AGGF1Q8N302 714 aaeCLIP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.664e-10■■■□□ 16.5
HIF1A-203ENST00000394997 LRRC45Q96CN5 670 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 PLXNA3P51805 1871 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 B4GALT5O43286 388 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 TCF7P36402 384 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 PKDCCQ504Y2 493 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 DRICH1Q6PGQ1 229 aaPredicted RBP10.9□□□□□ -0.66
HIF1A-203ENST00000394997 ZNF276Q8N554 614 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 TWNKQ96RR1 684 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 EPN3Q9H201 632 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 EXOC7Q9UPT5 735 aa10.9□□□□□ -0.66
HIF1A-203ENST00000394997 DDNO94850 711 aaPredicted RBP10.9□□□□□ -0.67
HIF1A-203ENST00000394997 GABRB2P47870 512 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 ADCY1Q08828 1119 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 VSTM1Q6UX27 236 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 MZB1Q8WU39 189 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 PRPF31Q8WWY3 499 aaKnown RBP10.9□□□□□ -0.67
HIF1A-203ENST00000394997 CENPTQ96BT3 561 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 C16orf70Q9BSU1 422 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 AGTPBP1Q9UPW5 1226 aa10.9□□□□□ -0.67
HIF1A-203ENST00000394997 B4GALT4O60513 344 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms