RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ANKRD54Q6NXT1 300 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 USP37Q86T82 979 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 C12orf76Q8N812 135 aaPredicted RBP21.43■■□□□ 1.02
SNCA-203ENST00000394986 MLKLQ8NB16 471 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 MAN1C1Q9NR34 630 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 L1RE1Q9UN81 338 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 SNX9Q9Y5X1 595 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 H7C4K7 107 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 SRGAP2BP0DMP2 458 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 PAX3P23760 479 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 AP3M2P53677 418 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 ROR1Q01973 937 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 MYO1EQ12965 1108 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 TRPC3Q13507 836 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 LILRA6Q6PI73 481 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 SYCE2Q6PIF2 218 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 SV2AQ7L0J3 742 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.42■■□□□ 1.02
SNCA-203ENST00000394986 CEP63Q96MT8 703 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 RWDD2AQ9UIY3 292 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 CDH22Q9UJ99 828 aa21.42■■□□□ 1.02
SNCA-203ENST00000394986 IKBKBO14920 756 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 OAZ2O95190 189 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 CYP11A1P05108 521 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 OR4Q2P0C623 313 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 NCOA4Q13772 614 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 LEXMQ3ZCV2 418 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 ZACNQ401N2 412 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 DCAF17Q5H9S7 520 aaPredicted RBP21.41■■□□□ 1.02
SNCA-203ENST00000394986 TCERG1LQ5VWI1 586 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 SLC8B1Q6J4K2 584 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 CAVIN1Q6NZI2 390 aaKnown RBP21.41■■□□□ 1.02
SNCA-203ENST00000394986 C15orf39Q6ZRI6 1047 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 PDCL2Q8N4E4 241 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 TMEM209Q96SK2 561 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 SRRTQ9BXP5 876 aaKnown RBP21.41■■□□□ 1.02
SNCA-203ENST00000394986 XYLT2Q9H1B5 865 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■■■■■ 149.1
SNCA-203ENST00000394986 CD207Q9UJ71 328 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 UNC80Q8N2C7 3258 aa21.41■■□□□ 1.02
SNCA-203ENST00000394986 WDR27A2RRH5 827 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 CLSTN1O94985 981 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 RAB33AQ14088 237 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 CCDC40Q4G0X9 1142 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 FOXR2Q6PJQ5 311 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 FILIP1Q7Z7B0 1213 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 RTP3Q9BQQ7 232 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 GDAP2Q9NXN4 497 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 ARMCX3Q9UH62 379 aaPredicted RBP21.4■■□□□ 1.02
SNCA-203ENST00000394986 TSC2P49815 1807 aa21.4■■□□□ 1.02
SNCA-203ENST00000394986 SPDYE4A6NLX3 237 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 HUS1O60921 280 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 HLA-DRAP01903 254 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 CDR1P51861 262 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 MRPS5P82675 430 aaKnown RBP21.39■■□□□ 1.02
SNCA-203ENST00000394986 SOWAHAQ2M3V2 549 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 RARS2Q5T160 578 aaKnown RBP21.39■■□□□ 1.02
SNCA-203ENST00000394986 METTL23Q86XA0 190 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 SMRP1Q8NCR6 262 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 KREMEN2Q8NCW0 462 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 OR10T2Q8NGX3 314 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 TAS1R2Q8TE23 839 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 ATXN2LQ8WWM7 1075 aaKnown RBP21.39■■□□□ 1.02
SNCA-203ENST00000394986 DZANK1Q9NVP4 752 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 FBXW11Q9UKB1 542 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 DSEQ9UL01 958 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 POLIQ9UNA4 740 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 PLXNA3P51805 1871 aa21.39■■□□□ 1.02
SNCA-203ENST00000394986 ARHGEF37A1IGU5 675 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 GRXCR2A6NFK2 248 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 HCRTO43612 131 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 LRRN2O75325 713 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 RFPL2O75678 378 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 WEE2P0C1S8 567 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 CPB1P15086 417 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 PIK3CAP42336 1068 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 MCCD1P59942 119 aaPredicted RBP21.38■■□□□ 1.01
SNCA-203ENST00000394986 ENPEPQ07075 957 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 ZNF699Q32M78 642 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 PTCRAQ6ISU1 281 aaPredicted RBP21.38■■□□□ 1.01
SNCA-203ENST00000394986 TMC5Q6UXY8 1006 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 OSTM1Q86WC4 334 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 ASB2Q96Q27 587 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 MMS19Q96T76 1030 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 PI4K2AQ9BTU6 479 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 S1PR5Q9H228 398 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 NXF1Q9UBU9 619 aaKnown RBP21.38■■□□□ 1.01
SNCA-203ENST00000394986 ATICP31939 592 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 MXI1P50539 228 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 WDR72Q3MJ13 1102 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 CBWD6Q4V339 395 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 CBWD3Q5JTY5 395 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 CBWD5Q5RIA9 395 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 SPOPLQ6IQ16 392 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 SCARA5Q6ZMJ2 495 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 FRMD5Q7Z6J6 570 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 ADGRF2Q8IZF7 708 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 TOP6BLQ8N6T0 577 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 SLC35C1Q96A29 364 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 SYAP1Q96A49 352 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms