RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SNX24Q9Y343 169 aa6.01□□□□□ -1.45
RFFL-202ENST00000394597 TAF1P21675 1872 aa6□□□□□ -1.45
RFFL-202ENST00000394597 MYH7P12883 1935 aa6□□□□□ -1.45
RFFL-202ENST00000394597 SSU72P8A0A1W2PR75 194 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RRN3P2A6NIE6 340 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LRRC10BA6NIK2 292 aa6□□□□□ -1.45
RFFL-202ENST00000394597 AGPSO00116 658 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ZBTB39O15060 712 aa6□□□□□ -1.45
RFFL-202ENST00000394597 P4HA2O15460 535 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RAD51CO43502 376 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PYGBP11216 843 aa6□□□□□ -1.45
RFFL-202ENST00000394597 CD58P19256 250 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RGS2P41220 211 aa6□□□□□ -1.45
RFFL-202ENST00000394597 GJA8P48165 433 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ACOT2P49753 483 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PMS2P54278 862 aa6□□□□□ -1.45
RFFL-202ENST00000394597 NFX1Q12986 1120 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 ZCWPW2Q504Y3 356 aa6□□□□□ -1.45
RFFL-202ENST00000394597 KIAA1755Q5JYT7 1200 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LBX2Q6XYB7 198 aa6□□□□□ -1.45
RFFL-202ENST00000394597 WDR60Q8WVS4 1066 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TATDN2Q93075 761 aa6□□□□□ -1.45
RFFL-202ENST00000394597 NR1H4Q96RI1 486 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 KATNAL1Q9BW62 490 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LACRTQ9GZZ8 138 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TOPORSQ9NS56 1045 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 DNAJC17Q9NVM6 304 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 NDE1Q9NXR1 346 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ATXN10Q9UBB4 475 aa6□□□□□ -1.45
RFFL-202ENST00000394597 AMACRQ9UHK6 382 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ZFP69BQ9UJL9 534 aa6□□□□□ -1.45
RFFL-202ENST00000394597 AKAP11Q9UKA4 1901 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RIPK3Q9Y572 518 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LRP5O75197 1615 aa6□□□□□ -1.45
RFFL-202ENST00000394597 NFASCO94856 1347 aa6□□□□□ -1.45
RFFL-202ENST00000394597 FRMPD4Q14CM0 1322 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ZSCAN5CA6NGD5 496 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 SART1O43290 800 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 EXTL3O43909 919 aa6□□□□□ -1.45
RFFL-202ENST00000394597 MGRN1O60291 552 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ATP9AO75110 1047 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ACSL3O95573 720 aa6□□□□□ -1.45
RFFL-202ENST00000394597 GLI1P08151 1106 aa6□□□□□ -1.45
RFFL-202ENST00000394597 FAM153BP0C7A2 387 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ACTN1P12814 892 aa6□□□□□ -1.45
RFFL-202ENST00000394597 BRAFP15056 766 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TBXAS1P24557 533 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 PHBP35232 272 aa6□□□□□ -1.45
RFFL-202ENST00000394597 NAMPTP43490 491 aa6□□□□□ -1.45
RFFL-202ENST00000394597 KLK7P49862 253 aa6□□□□□ -1.45
RFFL-202ENST00000394597 DR1Q01658 176 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ECM1Q16610 540 aa6□□□□□ -1.45
RFFL-202ENST00000394597 FAM153CQ494X1 144 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PPP1R15BQ5SWA1 713 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TMEM139Q8IV31 216 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LRRC71Q8N4P6 559 aa6□□□□□ -1.45
RFFL-202ENST00000394597 CASKIN2Q8WXE0 1202 aa6□□□□□ -1.45
RFFL-202ENST00000394597 CLEC4DQ8WXI8 215 aa6□□□□□ -1.45
RFFL-202ENST00000394597 NMD3Q96D46 503 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 FAM129AQ9BZQ8 928 aa6□□□□□ -1.45
RFFL-202ENST00000394597 DMAP1Q9NPF5 467 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 APEX2Q9UBZ4 518 aa6□□□□□ -1.45
RFFL-202ENST00000394597 FAM153AQ9UHL3 310 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ZNF112Q9UJU3 913 aa6□□□□□ -1.45
RFFL-202ENST00000394597 VAV3Q9UKW4 847 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LZTS1Q9Y250 596 aa6□□□□□ -1.45
RFFL-202ENST00000394597 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PPME1Q9Y570 386 aa6□□□□□ -1.45
RFFL-202ENST00000394597 GRIN2DO15399 1336 aa6□□□□□ -1.45
RFFL-202ENST00000394597 GRID2IPA4D2P6 1211 aa6□□□□□ -1.45
RFFL-202ENST00000394597 SPATA31C2B4DYI2 1134 aa6□□□□□ -1.45
RFFL-202ENST00000394597 SPAG7O75391 227 aa6□□□□□ -1.45
RFFL-202ENST00000394597 E2F6O75461 281 aa6□□□□□ -1.45
RFFL-202ENST00000394597 IMPDH2P12268 514 aa6□□□□□ -1.45
RFFL-202ENST00000394597 ADORA2AP29274 412 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PHEXP78562 749 aa6□□□□□ -1.45
RFFL-202ENST00000394597 MED21Q13503 144 aa6□□□□□ -1.45
RFFL-202ENST00000394597 C11orf91Q3C1V1 193 aa6□□□□□ -1.45
RFFL-202ENST00000394597 FIGNQ5HY92 759 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RNF220Q5VTB9 566 aa6□□□□□ -1.45
RFFL-202ENST00000394597 IRGCQ6NXR0 463 aa6□□□□□ -1.45
RFFL-202ENST00000394597 KLC3Q6P597 504 aa6□□□□□ -1.45
RFFL-202ENST00000394597 RHOT2Q8IXI1 618 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TRIML2Q8N7C3 387 aa6□□□□□ -1.45
RFFL-202ENST00000394597 GADD45GIP1Q8TAE8 222 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 TEPSINQ96N21 525 aa6□□□□□ -1.45
RFFL-202ENST00000394597 CATSPER2Q96P56 530 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TUBB6Q9BUF5 446 aa6□□□□□ -1.45
RFFL-202ENST00000394597 KIFC3Q9BVG8 833 aa6□□□□□ -1.45
RFFL-202ENST00000394597 TARS2Q9BW92 718 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 MRPL47Q9HD33 250 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 VTA1Q9NP79 307 aa6□□□□□ -1.45
RFFL-202ENST00000394597 PRMT7Q9NVM4 692 aaPredicted RBP6□□□□□ -1.45
RFFL-202ENST00000394597 PTPN22Q9Y2R2 807 aa6□□□□□ -1.45
RFFL-202ENST00000394597 SNCAIPQ9Y6H5 919 aa6□□□□□ -1.45
RFFL-202ENST00000394597 C4AP0C0L4 1744 aa6□□□□□ -1.45
RFFL-202ENST00000394597 DDX60Q8IY21 1712 aaKnown RBP6□□□□□ -1.45
RFFL-202ENST00000394597 NKRFO15226 690 aaKnown RBP eCLIP5.99□□□□□ -1.45
RFFL-202ENST00000394597 GAS8O95995 478 aa5.99□□□□□ -1.45
RFFL-202ENST00000394597 C6orf222P0C671 652 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms