RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ANAPC7Q9UJX3 599 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 PIN4Q9Y237 131 aaKnown RBP23.62■■□□□ 1.37
HMGA2-203ENST00000393578 RALGAPA2Q2PPJ7 1873 aa23.62■■□□□ 1.37
HMGA2-203ENST00000393578 MMP8P22894 467 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SSTR3P32745 418 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-203ENST00000393578 RAP1GAPP47736 663 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SP3Q02447 781 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 PTP4A2Q12974 167 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 CXCL17Q6UXB2 119 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 TMEM35BQ8NCS4 154 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 TFAP2BQ92481 460 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 RNPC3Q96LT9 517 aaKnown RBP23.61■■□□□ 1.37
HMGA2-203ENST00000393578 NAP1L3Q99457 506 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SDCBP2Q9H190 292 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 MRPL47Q9HD33 250 aaKnown RBP23.61■■□□□ 1.37
HMGA2-203ENST00000393578 OGFRQ9NZT2 677 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 GTF2IRD1Q9UHL9 959 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 DMGDHQ9UI17 866 aaKnown RBP23.61■■□□□ 1.37
HMGA2-203ENST00000393578 CASP8AP2Q9UKL3 1982 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 CCDC66A2RUB6 948 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 CCDC188H7C350 402 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SPOPO43791 374 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 GUCY2FP51841 1108 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 CDH8P55286 799 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 NBPF20Q3BBV1 942 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 MAP9Q49MG5 647 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 ALKAL1Q6UXT8 129 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 KRT12Q99456 494 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 FUT8Q9BYC5 575 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SMYD3Q9H7B4 428 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 FAM53CQ9NYF3 392 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SCINQ9Y6U3 715 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 SCN10AQ9Y5Y9 1956 aa23.61■■□□□ 1.37
HMGA2-203ENST00000393578 KRIT1O00522 736 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 MED7O43513 233 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CTNNA2P26232 953 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CDH5P33151 784 aaPredicted RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CTNNA1P35221 906 aaKnown RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 PEX5P50542 639 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 RAD23BP54727 409 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 TRIM32Q13049 653 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 ZBTB6Q15916 424 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 PLEKHA7Q6IQ23 1121 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CCNI2Q6ZMN8 369 aaPredicted RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 MMS22LQ6ZRQ5 1243 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 KRT35Q92764 455 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CAPNS2Q96L46 248 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CELF4Q9BZC1 486 aaKnown RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 NXF3Q9H4D5 531 aaKnown RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CNTN3Q9P232 1028 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 L1RE1Q9UN81 338 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 HES2Q9Y543 173 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CEP83Q9Y592 693 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 MYO1FO00160 1098 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 CILPO75339 1184 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 ZMYND10O75800 440 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 FGGP02679 453 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 MYO1EQ12965 1108 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 C2CD6Q53TS8 623 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 TTC39CQ8N584 583 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 ZMAT2Q96NC0 199 aaKnown RBP23.6■■□□□ 1.37
HMGA2-203ENST00000393578 PCDHA3Q9Y5H8 950 aa23.6■■□□□ 1.37
HMGA2-203ENST00000393578 ADAMTS4O75173 837 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 RECQL4O94761 1208 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 CALB1P05937 261 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 CAP1Q01518 475 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 SLC7A5Q01650 507 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 MAMLD1Q13495 774 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 WHAMMQ8TF30 809 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 AP1M1Q9BXS5 423 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 XPNPEP3Q9NQH7 507 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 PARVAQ9NVD7 372 aa23.59■■□□□ 1.37
HMGA2-203ENST00000393578 SLC1A1P43005 524 aa23.58■■□□□ 1.37
HMGA2-203ENST00000393578 BEST2Q8NFU1 509 aa23.58■■□□□ 1.37
HMGA2-203ENST00000393578 TSPAN18Q96SJ8 248 aa23.58■■□□□ 1.37
HMGA2-203ENST00000393578 CXCL16Q9H2A7 254 aa23.58■■□□□ 1.37
HMGA2-203ENST00000393578 LHX5Q9H2C1 402 aa23.58■■□□□ 1.37
HMGA2-203ENST00000393578 M0QZ92 97 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 CD19P15391 556 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 MARCKSL1P49006 195 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 MRPS6P82932 125 aaKnown RBP23.58■■□□□ 1.36
HMGA2-203ENST00000393578 INCA1Q0VD86 236 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 UBXN11Q5T124 520 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 HDXQ7Z353 690 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 PHLDB2Q86SQ0 1253 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 RSPH3Q86UC2 560 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 SLC4A11Q8NBS3 891 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 C1orf131Q8NDD1 294 aaKnown RBP23.58■■□□□ 1.36
HMGA2-203ENST00000393578 TMEM176AQ96HP8 235 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 RNF186Q9NXI6 227 aa23.58■■□□□ 1.36
HMGA2-203ENST00000393578 SASH3O75995 380 aa23.57■■□□□ 1.36
HMGA2-203ENST00000393578 TNFRSF8P28908 595 aa23.57■■□□□ 1.36
HMGA2-203ENST00000393578 MRPS25P82663 173 aaKnown RBP23.57■■□□□ 1.36
HMGA2-203ENST00000393578 ZNF211Q13398 564 aaPredicted RBP23.57■■□□□ 1.36
HMGA2-203ENST00000393578 GDF6Q6KF10 455 aaPredicted RBP23.57■■□□□ 1.36
HMGA2-203ENST00000393578 LLGL2Q6P1M3 1020 aa23.57■■□□□ 1.36
HMGA2-203ENST00000393578 KLHL7Q8IXQ5 586 aa23.57■■□□□ 1.36
HMGA2-203ENST00000393578 WDTC1Q8N5D0 677 aa23.57■■□□□ 1.36
HMGA2-203ENST00000393578 TRIM7Q9C029 511 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms