RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 L1RE1Q9UN81 338 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 NLRC5Q86WI3 1866 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 TBXAS1P24557 533 aaPredicted RBP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 AARSP49588 968 aaKnown RBP eCLIP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 FXR1P51114 621 aaKnown RBP eCLIP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 GCNT1Q02742 428 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 DRAP1Q14919 205 aaPredicted RBP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 WSCD1Q658N2 575 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 FUT10Q6P4F1 479 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 SLC39A11Q8N1S5 342 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 APPL2Q8NEU8 664 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 CLP1Q92989 425 aaKnown RBP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 SUSD3Q96L08 255 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 B3GALT6Q96L58 329 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 MRPL45Q9BRJ2 306 aaKnown RBP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 PBX4Q9BYU1 374 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 BCO2Q9BYV7 579 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 GPR62Q9BZJ7 368 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 SPG21Q9NZD8 308 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 PCDHB12Q9Y5F1 795 aa18.24■□□□□ 0.51
ERCC2-202ENST00000391942 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
ERCC2-202ENST00000391942 ODC1P11926 461 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 CTNNB1P35222 781 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 USP8P40818 1118 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 TBX2Q13207 712 aaPredicted RBP18.23■□□□□ 0.51
ERCC2-202ENST00000391942 FIGNQ5HY92 759 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 CEP57Q86XR8 500 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 PDCL2Q8N4E4 241 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 SPAG5Q96R06 1193 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 C17orf80Q9BSJ5 609 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 NKX2-4Q9H2Z4 354 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 CISHQ9NSE2 258 aa18.23■□□□□ 0.51
ERCC2-202ENST00000391942 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.517e-8■■■■■ 131
ERCC2-202ENST00000391942 M0QZQ0 153 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TRAPPC3O43617 180 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TPM1P09493 284 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 KRT5P13647 590 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 RFX1P22670 979 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TKTP29401 623 aaKnown RBP18.22■□□□□ 0.51
ERCC2-202ENST00000391942 ADKP55263 362 aaKnown RBP18.22■□□□□ 0.51
ERCC2-202ENST00000391942 ORC1Q13415 861 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TRIM14Q14142 442 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TAS1R1Q7RTX1 841 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 ADGRF2Q8IZF7 708 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TOP6BLQ8N6T0 577 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 BAP1Q92560 729 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TMEM169Q96HH4 297 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 VN1R3Q9BXE9 311 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 STK33Q9BYT3 514 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 GPR88Q9GZN0 384 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 CAPN11Q9UMQ6 739 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 PCDHB4Q9Y5E5 795 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 TSC2P49815 1807 aa18.22■□□□□ 0.51
ERCC2-202ENST00000391942 A0A1W2PQJ5 194 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 F8VZ95 297 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 FOXN3O00409 490 aaPredicted RBP18.21■□□□□ 0.51
ERCC2-202ENST00000391942 HCRTO43612 131 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 ACO1P21399 889 aaKnown RBP18.21■□□□□ 0.51
ERCC2-202ENST00000391942 BMPR1AP36894 532 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 JAM2P57087 298 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 ZNF394Q53GI3 561 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 ENOSF1Q7L5Y1 443 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 OSTM1Q86WC4 334 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 OR6B3Q8NGW1 331 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 KBTBD7Q8WVZ9 684 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 FAM81BQ96LP2 452 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 SNX25Q9H3E2 840 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 CYP3A43Q9HB55 503 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 HMGXB4Q9UGU5 601 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 PCDHB8Q9UN66 801 aa18.21■□□□□ 0.51
ERCC2-202ENST00000391942 LUC7L2Q9Y383 392 aaKnown RBP18.21■□□□□ 0.51
ERCC2-202ENST00000391942 RANBP2P49792 3224 aaKnown RBP18.21■□□□□ 0.51
ERCC2-202ENST00000391942 FGF18O76093 207 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 GFPT2O94808 682 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 CALCAP01258 141 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 PAX3P23760 479 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 KRT9P35527 623 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 PPM1AP35813 382 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 YWHAEP62258 255 aaKnown RBP18.2■□□□□ 0.5
ERCC2-202ENST00000391942 ARID5AQ03989 594 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 RAB30Q15771 203 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 PDXDC1Q6P996 788 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 TMEM270Q6UE05 265 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 LIMS2Q7Z4I7 341 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 METTL23Q86XA0 190 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 UBR7Q8N806 425 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 ZNF397Q8NF99 534 aaPredicted RBP18.2■□□□□ 0.5
ERCC2-202ENST00000391942 SHC3Q92529 594 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 IQCDQ96DY2 449 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 FAXDC2Q96IV6 333 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 CERS4Q9HA82 394 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 VWA8A3KMH1 1905 aa18.2■□□□□ 0.5
ERCC2-202ENST00000391942 AKR1B15C9JRZ8 316 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms