RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 USP33Q8TEY7 942 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SLC5A5Q92911 643 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 CABYRO75952 493 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ASMTLO95671 621 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 BAG2O95816 211 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 VDRP11473 427 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 GTF2H3Q13889 308 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 CRLF3Q8IUI8 442 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 C1orf131Q8NDD1 294 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 ERGIC2Q96RQ1 377 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 METTL5Q9NRN9 209 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 DPP7Q9UHL4 492 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ATP1A1P05023 1023 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 GHRP10912 638 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 SLC11A2P49281 568 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 PDK1Q15118 436 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 TMC7Q7Z402 723 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 ACOT1Q86TX2 421 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 WDR49Q8IV35 697 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 RSAD1Q9HA92 442 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 MCF2P10911 925 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 RARRES1P49788 294 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 SESN2P58004 480 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 PTGISQ16647 500 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 FEZF2Q8TBJ5 459 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 FGD4Q96M96 766 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 AGAP3Q96P47 875 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 PPP1R2P1Q96PQ5 205 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.79□□□□□ -0.684e-7■■■□□ 19.2
PKP4-201ENST00000389757 SUN2Q9UH99 717 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 ESRRBO95718 433 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 NCF2P19878 526 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 LHX1P48742 406 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 SYDE1Q6ZW31 735 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 FBXO32Q969P5 355 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 GLTPD2A6NH11 291 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 GSTA4O15217 222 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 LAMB3Q13751 1172 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 ARHGEF7Q14155 803 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 OTOP1Q7RTM1 612 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 WDR75Q8IWA0 830 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 RAB42Q8N4Z0 105 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 MAML1Q92585 1016 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 EPS15L1Q9UBC2 864 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 PCDHAC2Q9Y5I4 1007 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 CTIFO43310 598 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 CSDE1O75534 798 aaKnown RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 ATICP31939 592 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 CLCN6P51797 869 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
PKP4-201ENST00000389757 HIF1AQ16665 826 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 GJB7Q6PEY0 223 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 TRIM65Q6PJ69 517 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 DDIT4Q9NX09 232 aa10.79□□□□□ -0.68
PKP4-201ENST00000389757 MAPTP10636 758 aaKnown RBP10.78□□□□□ -0.68
PKP4-201ENST00000389757 KRT35Q92764 455 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 TAF1DQ9H5J8 278 aaPredicted RBP10.78□□□□□ -0.68
PKP4-201ENST00000389757 VCX3AQ9NNX9 186 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 OLFML3Q9NRN5 406 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 AFF4Q9UHB7 1163 aaKnown RBP10.78□□□□□ -0.68
PKP4-201ENST00000389757 ESYT3A0FGR9 886 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 FKTNO75072 461 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 AXLP30530 894 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CASP4P49662 377 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SOX10P56693 466 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CYP24A1Q07973 514 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CCDC15Q0P6D6 951 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CDH18Q13634 790 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 MYBPC2Q14324 1141 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 THEMIS2Q5TEJ8 643 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SLC27A1Q6PCB7 646 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SNX19Q92543 992 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 ARHGEF26Q96DR7 871 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 TRPM5Q9NZQ8 1165 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SLC13A4Q9UKG4 626 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CKMP06732 381 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
PKP4-201ENST00000389757 BOLA3Q53S33 107 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CCNYL1Q8N7R7 359 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 HASPINQ8TF76 798 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 SNX12Q9UMY4 172 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.78□□□□□ -0.68
PKP4-201ENST00000389757 ADGRB2O60241 1585 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 TMCC1O94876 653 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 AMHP03971 560 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 LGALS2P05162 132 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 CXCL8P10145 99 aa10.78□□□□□ -0.68
PKP4-201ENST00000389757 KLK7P49862 253 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms