RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TMEM120AQ9BXJ8 343 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 UNC45AQ9H3U1 944 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 SUDS3Q9H7L9 328 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 ARMCX1Q9P291 453 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 EML1O00423 815 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 CALCAP01258 141 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF667Q5HYK9 610 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 PDZD8Q8NEN9 1154 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 KCND2Q9NZV8 630 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 INPP5FQ9Y2H2 1132 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 LDHAP00338 332 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 NDUFAF2Q8N183 169 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 FBXO36Q8NEA4 188 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 PAFAH2Q99487 392 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■□ 26.4
TRAPPC9-201ENST00000389328 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
TRAPPC9-201ENST00000389328 KCNN4O15554 427 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ADCY3O60266 1144 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ARP10275 920 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 BGNP21810 368 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 TYK2P29597 1187 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PTDSS1P48651 473 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 KRT76Q01546 638 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 WASHC2DQ5SRD0 308 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAM102AQ5T9C2 384 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 MGRN1O60291 552 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ADRA1DP25100 572 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ARL4AP40617 200 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 DRG2P55039 364 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 DSG1Q02413 1049 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 FAXCQ5TGI0 409 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 MROH9Q5TGP6 573 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 NLRP4Q96MN2 994 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZSCAN5DPP0CG00 497 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 CCND2P30279 289 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 SSTR1P30872 391 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 SREBF1P36956 1147 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 RASA2Q15283 850 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 CCNG2Q16589 344 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF572Q7Z3I7 529 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 SPATA18Q8TC71 538 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PARD3BQ8TEW8 1205 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ADA2Q9NZK5 511 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 C2CD2Q9Y426 696 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 GSCP56915 257 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 DLG4P78352 724 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ASTE1Q2TB18 679 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 FITM2Q8N6M3 262 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZNF75CPQ92670 426 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 EFHD1Q9BUP0 239 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 RHBDL2Q9NX52 303 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 USP21Q9UK80 565 aa13.8□□□□□ -0.2
TRAPPC9-201ENST00000389328 ASTN1O14525 1302 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 AFF2P51816 1311 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 GIPC1O14908 333 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 MAP3K6O95382 1288 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 CREB1P16220 341 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PPIL6Q8IXY8 311 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 GALNT4Q8N4A0 578 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 TRPV6Q9H1D0 765 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC38A10Q9HBR0 1119 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 CYP26B1Q9NR63 512 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 SNRPAP09012 282 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 OSBPP22059 807 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 EEF1B2P24534 225 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PEX5P50542 639 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 SESN2P58004 480 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PHEXP78562 749 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PPATQ06203 517 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 IFRD2Q12894 506 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 SCUBE1Q8IWY4 988 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms