RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ZC3H12BQ5HYM0 836 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PTPRZ1P23471 2315 aaPredicted RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 SPAG6O75602 509 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 ITGA4P13612 1032 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 PDGFRAP16234 1089 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 TMEM8AQ9HCN3 771 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 FAM47DPA6NHR8 397 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 NLRP11P59045 1033 aaKnown RBP12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 KRT72Q14CN4 511 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
KCNQ3-201ENST00000388996 GOLGA8RI6L899 631 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ENTPD3O75355 529 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PCMTD2Q9NV79 361 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PCM1Q15154 2024 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 CYP2C9P11712 490 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HIST1H2AHQ96KK5 128 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HIST1H2AJQ99878 128 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 H2AFJQ9BTM1 129 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 FAM32AQ9Y421 112 aaKnown RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PKP3Q9Y446 797 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 GGA3Q9NZ52 723 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ARHGAP26Q9UNA1 814 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SLIT1O75093 1534 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ARL4DP49703 201 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 GRAMD1AQ96CP6 724 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SERPINB9P50453 376 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ARHGEF7Q14155 803 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 CCDC90BQ9GZT6 254 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 CETPP11597 493 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ADCK2Q7Z695 626 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 FOXP3Q9BZS1 431 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 UCHL3P15374 230 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 ATP9BO43861 1147 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PCSK7Q16549 785 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 EPN3Q9H201 632 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 MARCOQ9UEW3 520 aaPredicted RBP12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
KCNQ3-201ENST00000388996 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 HLA-DRAP01903 254 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 PDHBP11177 359 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 GLB1LQ6UWU2 654 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 HEATR9A2RTY3 570 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 MYMKA6NI61 221 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 PGM1P36871 562 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 PPP3CCP48454 512 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 TERF2Q15554 542 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 ZNF34Q8IZ26 560 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 NPTXRO95502 500 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 AGTP01019 485 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 PTK7Q13308 1070 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 SMTNL2Q2TAL5 461 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 ZFYVE28Q9HCC9 887 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 ARL2BPQ9Y2Y0 163 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 PJA2O43164 708 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 HPCAP84074 193 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 KDSRQ06136 332 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 CDH18Q13634 790 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 E2F4Q16254 413 aa12.87□□□□□ -0.35
KCNQ3-201ENST00000388996 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms