RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.89■□□□□ 0.77
CSPG5-202ENST00000383738 SALL4Q9UJQ4 1053 aa19.89■□□□□ 0.77
CSPG5-202ENST00000383738 PPFIA2O75334 1257 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 CDR2Q01850 454 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 ITGB3BPQ13352 177 aaPredicted RBP19.88■□□□□ 0.77
CSPG5-202ENST00000383738 FAM102AQ5T9C2 384 aaPredicted RBP19.88■□□□□ 0.77
CSPG5-202ENST00000383738 HASPINQ8TF76 798 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 MYH2Q9UKX2 1941 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 ITGB3P05106 788 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 PON1P27169 355 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 KLC1Q07866 573 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 BEST2Q8NFU1 509 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 PHRF1Q9P1Y6 1649 aaKnown RBP19.88■□□□□ 0.77
CSPG5-202ENST00000383738 PRPSAP2O60256 369 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 SHBGP04278 402 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 LCP1P13796 627 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 METTL7BQ6UX53 244 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 USP50Q70EL3 339 aaPredicted RBP19.88■□□□□ 0.77
CSPG5-202ENST00000383738 SPATA24Q86W54 205 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 PARD3BQ8TEW8 1205 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 SLC5A5Q92911 643 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 ERP44Q9BS26 406 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 UBXN6Q9BZV1 441 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 KCNMB3Q9NPA1 279 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 NAGPAQ9UK23 515 aa19.88■□□□□ 0.77
CSPG5-202ENST00000383738 PSMD10O75832 226 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 THPOP40225 353 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 SURF1Q15526 300 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 IER5Q5VY09 327 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 PPARGC1AQ9UBK2 798 aaKnown RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 LRRC10BA6NIK2 292 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 TRAPPC3O43617 180 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 PGK1P00558 417 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 HSPA9P38646 679 aaKnown RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 KCNMA1Q12791 1236 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 CCDC117Q8IWD4 279 aaPredicted RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 RBBP8NLQ8NC74 664 aaPredicted RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 SIK2Q9H0K1 926 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 BATF3Q9NR55 127 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 RGPD1P0DJD0 1748 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 KLRG2A4D1S0 409 aaPredicted RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 SNHG28P0DPA3 235 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 CCND1P24385 295 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 C4orf32Q8N8J7 132 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 STK33Q9BYT3 514 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 STOML1Q9UBI4 398 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 MED7O43513 233 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 MAP3K6O95382 1288 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 MOCS2O96007 188 aaPredicted RBP19.87■□□□□ 0.77
CSPG5-202ENST00000383738 MAN1A1P33908 653 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 PBX1P40424 430 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 COPS2P61201 443 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 HSDL1Q3SXM5 330 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 AADACL2Q6P093 401 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 LRIG3Q6UXM1 1119 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 KAT5Q92993 513 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 TSNARE1Q96NA8 513 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 OSBPL7Q9BZF2 842 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 UBN1Q9NPG3 1134 aa19.87■□□□□ 0.77
CSPG5-202ENST00000383738 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 NME3Q13232 169 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 PLCB4Q15147 1175 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 LRRC43Q8N309 656 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.86■□□□□ 0.77
CSPG5-202ENST00000383738 PIK3R5Q8WYR1 880 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 TATDN2Q93075 761 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 SHISA4Q96DD7 197 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 PPP2R3BQ9Y5P8 575 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 A8MUI8 341 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 FOXO6A8MYZ6 492 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 ANKRD63C9JTQ0 380 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 SLC12A3P55017 1021 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 RWDD2BP57060 319 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 SV2AQ7L0J3 742 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 C4orf19Q8IY42 314 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 DNAJB3Q8WWF6 145 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 ATG4AQ8WYN0 398 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 P3H4Q92791 437 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 C15orf41Q9Y2V0 281 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 KLRC4O43908 158 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 RWDD4Q6NW29 188 aaKnown RBP19.86■□□□□ 0.77
CSPG5-202ENST00000383738 MARCOQ9UEW3 520 aaPredicted RBP19.86■□□□□ 0.77
CSPG5-202ENST00000383738 HES2Q9Y543 173 aa19.86■□□□□ 0.77
CSPG5-202ENST00000383738 GON4LQ3T8J9 2241 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 CCDC195A0A1B0GUA6 201 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 GLTPD2A6NH11 291 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 CXCL8P10145 99 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 HOXD10P28358 340 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 CCNHP51946 323 aaPredicted RBP19.85■□□□□ 0.77
CSPG5-202ENST00000383738 MRPS9P82933 396 aaKnown RBP19.85■□□□□ 0.77
CSPG5-202ENST00000383738 KRT17Q04695 432 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 KDSRQ06136 332 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 SPARCL1Q14515 664 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 TMEM132DQ14C87 1099 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 CYP4A22Q5TCH4 519 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 AGBL2Q5U5Z8 902 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 SH3RF1Q7Z6J0 888 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 DNAJC9Q8WXX5 260 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 CYP4F11Q9HBI6 524 aa19.85■□□□□ 0.77
CSPG5-202ENST00000383738 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms