RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 BRD2P25440 801 aaKnown RBP18.38■□□□□ 0.53
RPAIN-203ENST00000381209 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
RPAIN-203ENST00000381209 PSMC4P43686 418 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 GJA9P57773 515 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 LACTBP83111 547 aaPredicted RBP18.38■□□□□ 0.53
RPAIN-203ENST00000381209 SEL1L2Q5TEA6 688 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 SMC1BQ8NDV3 1235 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 TRPV1Q8NER1 839 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 HPDLQ96IR7 371 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 DPP3Q9NY33 737 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 CEP83Q9Y592 693 aa18.38■□□□□ 0.53
RPAIN-203ENST00000381209 SART1O43290 800 aaKnown RBP18.37■□□□□ 0.53
RPAIN-203ENST00000381209 GLI1P08151 1106 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 MYBL2P10244 700 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 CRYBB1P53674 252 aaPredicted RBP18.37■□□□□ 0.53
RPAIN-203ENST00000381209 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
RPAIN-203ENST00000381209 RWDD2BP57060 319 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 NKX3-2P78367 333 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 SNX17Q15036 470 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 TAF2Q6P1X5 1199 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 EMBQ6PCB8 327 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 MMS22LQ6ZRQ5 1243 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 MAATS1Q7Z4T9 603 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 CCDC26Q8TAB7 109 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■■■■■ 32.7
RPAIN-203ENST00000381209 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 SNX27Q96L92 541 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 TSPAN18Q96SJ8 248 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 UPF3AQ9H1J1 476 aaKnown RBP18.37■□□□□ 0.53
RPAIN-203ENST00000381209 LHX5Q9H2C1 402 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 ACBD3Q9H3P7 528 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 AGAP1Q9UPQ3 857 aa18.37■□□□□ 0.53
RPAIN-203ENST00000381209 A0A0U1RQG5 324 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-203ENST00000381209 BHMG1C9JSJ3 638 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-203ENST00000381209 CILPO75339 1184 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 PROSCO94903 275 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 ITGA4P13612 1032 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 MAN1A1P33908 653 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 MARCKSL1P49006 195 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 EPHB4P54760 987 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 MRPS25P82663 173 aaKnown RBP18.36■□□□□ 0.53
RPAIN-203ENST00000381209 GUCY2DQ02846 1103 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 GPS2Q13227 327 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-203ENST00000381209 NNTQ13423 1086 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 TFAP2BQ92481 460 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-203ENST00000381209 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 EPB41L5Q9HCM4 733 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
RPAIN-203ENST00000381209 RAD23BP54727 409 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 ZNF200P98182 395 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-203ENST00000381209 PAK2Q13177 524 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 SMC1AQ14683 1233 aaKnown RBP18.35■□□□□ 0.53
RPAIN-203ENST00000381209 ZBTB6Q15916 424 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 CAVIN3Q969G5 261 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 EIF2AQ9BY44 585 aaKnown RBP18.35■□□□□ 0.53
RPAIN-203ENST00000381209 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 SPC25Q9HBM1 224 aa18.35■□□□□ 0.53
RPAIN-203ENST00000381209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPAIN-203ENST00000381209 C6orf222P0C671 652 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 SSTR3P32745 418 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 TNNT3P45378 269 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 RAP1GAPP47736 663 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 TAP1Q03518 808 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 INCA1Q0VD86 236 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 MYO1EQ12965 1108 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 ALKAL1Q6UXT8 129 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 TRIB2Q92519 343 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 TMEM176AQ96HP8 235 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 DDX47Q9H0S4 455 aaKnown RBP18.34■□□□□ 0.53
RPAIN-203ENST00000381209 CNTN3Q9P232 1028 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 KIAA1257Q9ULG3 409 aa18.34■□□□□ 0.53
RPAIN-203ENST00000381209 TCRBV5S1A1TA0A578 114 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 PYGMP11217 842 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 CD19P15391 556 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 FLT3LGP49771 235 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 CDH8P55286 799 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-203ENST00000381209 CUL1Q13616 776 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 C2CD6Q53TS8 623 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 ERICH1Q86X53 443 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 GSPT2Q8IYD1 628 aaKnown RBP18.33■□□□□ 0.53
RPAIN-203ENST00000381209 WDTC1Q8N5D0 677 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 TMEM40Q8WWA1 233 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms