RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PTDSS1P48651 473 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 DNAJC3Q13217 504 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 LMBRD2Q68DH5 695 aaPredicted RBP17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 FBXL18Q96ME1 805 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM118BQ9BPY3 351 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 CCDC77Q9BR77 488 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 LGALS13Q9UHV8 139 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 PHTF1Q9UMS5 762 aa17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-201ENST00000378133 RASA4BC9J798 803 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 RASA4O43374 803 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 GNAT1P11488 350 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ADCY8P40145 1251 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 TUBP50607 506 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 WDR4P57081 412 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ZNF449Q6P9G9 518 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ZNF513Q8N8E2 541 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 CEP170P1Q96L14 293 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 SYT15Q9BQS2 421 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ANAPC5Q9UJX4 755 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM47DPA6NHR8 397 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ABLIM1O14639 778 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 HNRNPDLO14979 420 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 EPHB2P29323 1055 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ALDH3A1P30838 453 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 JAK3P52333 1124 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 TSNAXIP1Q2TAA8 658 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ENDOVQ8N8Q3 282 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 ASAP3Q8TDY4 903 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
PCDHA1-201ENST00000378133 RASSF2P50749 326 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 KLC1Q07866 573 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TMEM154Q6P9G4 183 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TTC8Q8TAM2 541 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 DNAJC9Q8WXX5 260 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ZNF516Q92618 1163 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SLC7A6OSQ96CW6 309 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 PDCD2LQ9BRP1 358 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SLC38A10Q9HBR0 1119 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ACTL7BQ9Y614 415 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 DCTN3O75935 186 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 MYBL1P10243 752 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 KCNA3P22001 575 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 GTF2H1P32780 548 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 PTK6Q13882 451 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 LBRQ14739 615 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 CMPK2Q5EBM0 449 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 USP37Q86T82 979 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 GPD1LQ8N335 351 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TEKT4Q8WW24 435 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 DDX27Q96GQ7 796 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 NTPCRQ9BSD7 190 aaKnown RBP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ENTPD5O75356 428 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SPAG7O75391 227 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 NPTXRO95502 500 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 T-ENOLP0DO92 83 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 RALAP11233 206 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ATF2P15336 505 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ACADSP16219 412 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 DPEP1P16444 411 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SFNP31947 248 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SSTR3P32745 418 aaPredicted RBP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 KRT76Q01546 638 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 GCNT1Q02742 428 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 CAV1Q03135 178 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TMED2Q15363 201 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 WASHC2DQ5SRD0 308 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TMEM63BQ5T3F8 832 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ATL2Q8NHH9 583 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 BICD1Q96G01 975 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 TRAIPQ9BWF2 469 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
PCDHA1-201ENST00000378133 ZNF862O60290 1169 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 GAS8O95995 478 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 RAB27AP51159 221 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 GHRHRQ02643 423 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 MUM1Q2TAK8 710 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 CWF19L1Q69YN2 538 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 SPOCK2Q92563 424 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 SLCO1B3Q9NPD5 702 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 PXMP2Q9NR77 195 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 C1orf112Q9NSG2 853 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 WDR46O15213 610 aaKnown RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 MAGEB2O15479 319 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 CFHP08603 1231 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 MOGSQ13724 837 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 STAT4Q14765 748 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 SGSM1Q2NKQ1 1148 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 PRUNE1Q86TP1 453 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 MFN1Q8IWA4 741 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 RBBP8NLQ8NC74 664 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 GRK7Q8WTQ7 553 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 MAIP1Q8WWC4 291 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms