RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CYP4F11Q9HBI6 524 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 ABCF3Q9NUQ8 709 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 IRAK4Q9NWZ3 460 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 GABBR1Q9UBS5 961 aa9.21□□□□□ -0.94
PCDH9-202ENST00000377865 ATP9AO75110 1047 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 ABHD2P08910 425 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 EEF1DP29692 281 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 MTHFD1LQ6UB35 978 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF720Q7Z2F6 126 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 AGAP11Q8TF27 550 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 SLC35C1Q96A29 364 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RTFDC1Q9BY42 306 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RNPEPL1Q9HAU8 725 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF302Q9NR11 478 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 CLRN2A0PK11 232 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 AP3B1O00203 1094 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 EPHB6O15197 1021 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 NDUFB10O96000 172 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 PAEPP09466 180 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 CDH6P55285 790 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 EFTUD2Q15029 972 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RABGAP1LQ5R372 815 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 TBC1D16Q8TBP0 767 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF398Q8TD17 642 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 PBXIP1Q96AQ6 731 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 TMEM120AQ9BXJ8 343 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 GRID1Q9ULK0 1009 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 SHOC2Q9UQ13 582 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RSPH10B2B2RC85 870 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 UNC5CO95185 931 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 APOEP02649 317 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RSPH10BP0C881 870 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 C16orf87Q6PH81 154 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 APTXQ7Z2E3 356 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 APOL6Q9BWW8 343 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 UNC45AQ9H3U1 944 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 NGRNQ9NPE2 291 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 IGSF9BQ9UPX0 1349 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 EFNA5P52803 228 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 COPAP53621 1224 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 AUHQ13825 339 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 MTDHQ86UE4 582 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 PCSK1NQ9UHG2 260 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 CHMP2BQ9UQN3 213 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 PPP2R5CQ13362 524 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 STILQ15468 1287 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 MAPK6Q16659 721 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 DUOXA2Q1HG44 320 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 ARL13BQ3SXY8 428 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 MDH1BQ5I0G3 518 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 SLC20A1Q8WUM9 679 aa9.2□□□□□ -0.94
PCDH9-202ENST00000377865 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-202ENST00000377865 DNALI1O14645 258 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 KCNN4O15554 427 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 OCA2Q04671 838 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 RRP1BQ14684 758 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CHI3L2Q15782 390 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 NSUN6Q8TEA1 469 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC138Q96M89 665 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF341Q9BYN7 854 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 TBX20Q9UMR3 447 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 GRIN2DO15399 1336 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 STRNO43815 780 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SHBGP04278 402 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ATP4AP20648 1035 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CNTFP26441 200 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 TYK2P29597 1187 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CACNA2D1P54289 1103 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PARP6Q2NL67 630 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ITPRIPL1Q6GPH6 555 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 GMCL1P1Q8NEA9 526 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 EML4Q9HC35 981 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PCDH9Q9HC56 1237 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CDY2AQ9Y6F7 541 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CDY1Q9Y6F8 540 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ENTPD3O75355 529 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 RARAP10276 462 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 TRIP10Q15642 601 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 TFDP3Q5H9I0 405 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 FAM102AQ5T9C2 384 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 LRP10Q7Z4F1 713 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ATG4AQ8WYN0 398 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms