RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 DEF6Q9H4E7 631 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 KCND1Q9NSA2 647 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 NOCTQ9UK39 431 aaKnown RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 CNTN6Q9UQ52 1028 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 PCDHB4Q9Y5E5 795 aa11.2□□□□□ -0.62
PDPN-203ENST00000376061 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
PDPN-203ENST00000376061 A0A087X0T9 212 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 SPTLC1O15269 473 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 AKR1B10O60218 316 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 LCA5LO95447 670 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 POMCP01189 267 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 CCDC175P0C221 793 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 FAM228BP0C875 321 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 FGFR1P11362 822 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 P4HA1P13674 534 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 CD58P19256 250 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 PNPLA4P41247 253 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 YWHAEP62258 255 aaKnown RBP11.19□□□□□ -0.62
PDPN-203ENST00000376061 GFPT1Q06210 699 aaPredicted RBP11.19□□□□□ -0.62
PDPN-203ENST00000376061 NOP9Q86U38 636 aaKnown RBP11.19□□□□□ -0.62
PDPN-203ENST00000376061 LNX1Q8TBB1 728 aaPredicted RBP11.19□□□□□ -0.62
PDPN-203ENST00000376061 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 CYP3A43Q9HB55 503 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 ACP6Q9NPH0 428 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 CISHQ9NSE2 258 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
PDPN-203ENST00000376061 CASTOR2A6NHX0 329 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDPN-203ENST00000376061 ZNF500O60304 480 aaPredicted RBP11.18□□□□□ -0.62
PDPN-203ENST00000376061 B4GALT3O60512 393 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CALCAP01258 141 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CYP11B1P15538 503 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 RAG1P15918 1043 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CHRNB2P17787 502 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 TAF6P49848 677 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 PDE6CP51160 858 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CDH8P55286 799 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CYP27A1Q02318 531 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 INCA1Q0VD86 236 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 TUSC3Q13454 348 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 SLC18A3Q16572 532 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 SV2CQ496J9 727 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 NOMO2Q5JPE7 1267 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 TMEM270Q6UE05 265 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 TRMT1Q9NXH9 659 aaKnown RBP11.18□□□□□ -0.62
PDPN-203ENST00000376061 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
PDPN-203ENST00000376061 A0A0U1RQJ8 604 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 PODXLO00592 558 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 ZSCAN12O43309 604 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 CSF2RAP15509 400 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 IGFBP6P24592 240 aaPredicted RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 RPL9P32969 192 aaKnown RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 GATMP50440 423 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 CLCNKBP51801 687 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 LILRA4P59901 499 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 CDR2Q01850 454 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 DSC1Q08554 894 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 SPA17Q15506 151 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 TAF3Q5VWG9 929 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 MFSD5Q6N075 450 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDPN-203ENST00000376061 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 NPAS4Q8IUM7 802 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 REXO1L1PQ8IX06 675 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 C3orf58Q8NDZ4 430 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 TWNKQ96RR1 684 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 AGPAT1Q99943 283 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 PAAF1Q9BRP4 392 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDPN-203ENST00000376061 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
PDPN-203ENST00000376061 TBC1D13Q9NVG8 400 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 ADAMTS1Q9UHI8 967 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 KIAA1671Q9BY89 1806 aa11.17□□□□□ -0.62
PDPN-203ENST00000376061 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 CCP110O43303 1012 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 HOXA2O43364 376 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 CILPO75339 1184 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 PFKMP08237 780 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 MMEP08473 750 aa11.16□□□□□ -0.62
PDPN-203ENST00000376061 GNA15P30679 374 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms