RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 GEMIN4P57678 1058 aaKnown RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 TUBA1BP68363 451 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 KRT72Q14CN4 511 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DSTYKQ6XUX3 929 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 TUBA1AQ71U36 451 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 RFX6Q8HWS3 928 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DEPDC7Q96QD5 511 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PRKAG3Q9UGI9 489 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 POTEMA6NI47 508 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 DNALI1O14645 258 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 PEX1O43933 1283 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 ZNF24P17028 368 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 NUDT2P50583 147 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PTK7Q13308 1070 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PICALMQ13492 652 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 MAPK6Q16659 721 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 PFKFB3Q16875 520 aaPredicted RBP10.74□□□□□ -0.69
CD28-202ENST00000374481 C3orf62Q6ZUJ4 267 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 AGR3Q8TD06 166 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 NEUROG2Q9H2A3 272 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 HMG20AQ9NP66 347 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 OSGEPQ9NPF4 335 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 WASF2Q9Y6W5 498 aa10.74□□□□□ -0.69
CD28-202ENST00000374481 NPHP4O75161 1426 aaPredicted RBP10.73□□□□□ -0.69
CD28-202ENST00000374481 IGKV5-2P06315 115 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 PCP11498 1178 aaKnown RBP10.73□□□□□ -0.69
CD28-202ENST00000374481 ADAM17P78536 824 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 XIAPP98170 497 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 PRPSAP1Q14558 356 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 CLNKQ7Z7G1 428 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ZNF398Q8TD17 642 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 RAD54LQ92698 747 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 OSBPL6Q9BZF3 934 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 TMOD3Q9NYL9 352 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 STMN3Q9NZ72 180 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 A0A087X0B3 334 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 MEI4A8MW99 385 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 NFIBO00712 420 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 SPTLC1O15269 473 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ZNF12P17014 697 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 S100A5P33763 92 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 NPEPPSP55786 919 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 LSAMPQ13449 338 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ACSBG2Q5FVE4 666 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 TTC27Q6P3X3 843 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 RAPH1Q70E73 1250 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ZSWIM1Q9BR11 485 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 C1orf50Q9BV19 199 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 GLT8D2Q9H1C3 349 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 TBCCD1Q9NVR7 557 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 CROTQ9UKG9 612 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 SNX13Q9Y5W8 968 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ABCB11O95342 1321 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 PRAMEF22A3QJZ6 481 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 IDH3BO43837 385 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 CD19P15391 556 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 BGNP21810 368 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 ACVR2BQ13705 512 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 LPCAT4Q643R3 524 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 AGPAT1Q99943 283 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 MID2Q9UJV3 735 aa10.73□□□□□ -0.69
CD28-202ENST00000374481 NOTOA8MTQ0 251 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 PDLIM1O00151 329 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 KIAA0391O15091 583 aaKnown RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 CAMTA2O94983 1202 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 GH1P01241 217 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 HOXD12P35452 270 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 MXI1P50539 228 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 ODR4Q5SWX8 454 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 DARS2Q6PI48 645 aaKnown RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 LCORLQ8N3X6 602 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 SMYD1Q8NB12 490 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 ERLEC1Q96DZ1 483 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 PHF12Q96QT6 1004 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 FAM118BQ9BPY3 351 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 DHX36Q9H2U1 1008 aaKnown RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 DSEQ9UL01 958 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 GLI2P10070 1586 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 EDF1O60869 148 aaKnown RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 EYA4O95677 639 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 CHEK2O96017 543 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 TAC1P20366 129 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 MAPK10P53779 464 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 GSTO1P78417 241 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 EFTUD2Q15029 972 aaKnown RBP eCLIP10.72□□□□□ -0.69
CD28-202ENST00000374481 PDK4Q16654 411 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 ANO4Q32M45 955 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 AAGABQ6PD74 315 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 ZNF571Q7Z3V5 609 aaPredicted RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 FRMD5Q7Z6J6 570 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 RSPH3Q86UC2 560 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 NUP93Q8N1F7 819 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 ST13P5Q8NFI4 369 aaPredicted RBP10.72□□□□□ -0.69
CD28-202ENST00000374481 ARL8BQ9NVJ2 186 aa10.72□□□□□ -0.69
CD28-202ENST00000374481 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms