RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 GPS1Q13098 491 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
CXCL12-203ENST00000374429 ACOT1Q86TX2 421 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 HASPINQ8TF76 798 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 SCFD2Q8WU76 684 aa11.45□□□□□ -0.58
CXCL12-203ENST00000374429 GPR25O00155 361 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ITGA8P53708 1063 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ZNF844Q08AG5 666 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ALCAMQ13740 583 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 DENND1BQ6P3S1 775 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ACTRT1Q8TDG2 376 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 GDF3Q9NR23 364 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 RNF14Q9UBS8 474 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 HTTP42858 3142 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 LACTBL1A8MY62 500 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 GOLGA8KD6RF30 607 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 MYL3P08590 195 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 STAG3L1P0CL83 205 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 KRT15P19012 456 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 TMED2Q15363 201 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 C15orf59Q2T9L4 293 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 P3H1Q32P28 736 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ZACNQ401N2 412 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 JADE1Q6IE81 842 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 MFSD7Q6UXD7 560 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 RFX6Q8HWS3 928 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 OTUD6BQ8N6M0 293 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ATP6V1G3Q96LB4 118 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 PLVAPQ9BX97 442 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 METTL5Q9NRN9 209 aaKnown RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 FAM53CQ9NYF3 392 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 ARHGAP28Q9P2N2 729 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 UNC80Q8N2C7 3258 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 PLA2G6O60733 806 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 TOM1L1O75674 476 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 UBE4BO95155 1302 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 LCP1P13796 627 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 RFC1P35251 1148 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 COILP38432 576 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 CETN2P41208 172 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 NAMPTP43490 491 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 SCUBE3Q8IX30 993 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 WHAMMQ8TF30 809 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 B3GNT5Q9BYG0 378 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 OSBPL8Q9BZF1 889 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 C12orf65Q9H3J6 166 aaKnown RBP11.44□□□□□ -0.58
CXCL12-203ENST00000374429 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 SAYSD1Q9NPB0 183 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 SNTG2Q9NY99 539 aa11.44□□□□□ -0.58
CXCL12-203ENST00000374429 PASKQ96RG2 1323 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 H3BRB1 525 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CCDC188H7C350 402 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 KIF3CO14782 793 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 MAFGO15525 162 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CD48P09326 243 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CLTAP09496 248 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 ACAT1P24752 427 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 IRX4P78413 519 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 SLFN12LQ6IEE8 588 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 EFCAB13Q8IY85 973 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 KCTD6Q8NC69 237 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 RAPGEF5Q92565 580 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 GPR20Q99678 358 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 PRDM16Q9HAZ2 1276 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 LSP1P33241 339 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 BBS9Q3SYG4 887 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 TWNKQ96RR1 684 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CARD9Q9H257 536 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 SEPT10Q9P0V9 454 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 DNPEPQ9ULA0 475 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 RASGRF2O14827 1237 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 GAS8O95995 478 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 KRT3P12035 628 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 PAX7P23759 505 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 ARSEP51690 589 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 FAM133BQ5BKY9 247 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 NPNTQ6UXI9 565 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 TMC3Q7Z5M5 1100 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 ANKS1BQ7Z6G8 1248 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 CABS1Q96KC9 395 aa11.43□□□□□ -0.58
CXCL12-203ENST00000374429 MAK16Q9BXY0 300 aaKnown RBP11.43□□□□□ -0.58
CXCL12-203ENST00000374429 DHX33Q9H6R0 707 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms