RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ORC1Q13415 861 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 GLRA4Q5JXX5 417 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 LIN9Q5TKA1 542 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 PHF13Q86YI8 300 aaPredicted RBP17.99■□□□□ 0.47
PTPN20-203ENST00000374342 CPNE8Q86YQ8 564 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 NME8Q8N427 588 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
PTPN20-203ENST00000374342 TFAP2BQ92481 460 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 PLEKHA5Q9HAU0 1116 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 RNF186Q9NXI6 227 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 HMGXB4Q9UGU5 601 aa17.99■□□□□ 0.47
PTPN20-203ENST00000374342 M0QZ92 97 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 ADAMTS4O75173 837 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 ZMYND10O75800 440 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 ZRANB2O95218 330 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 MCM3P25205 808 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 TNNC1P63316 161 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 MRPS6P82932 125 aaKnown RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 PPP1R2P3Q6NXS1 205 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 UBL4BQ8N7F7 174 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 ALG3Q92685 438 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 KRT35Q92764 455 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 ZMAT2Q96NC0 199 aaKnown RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 VRTNQ9H8Y1 702 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 TUBGCP4Q9UGJ1 667 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 DERAQ9Y315 318 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 LSM8O95777 96 aaKnown RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 AKAP5P24588 427 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 HDAC7Q8WUI4 952 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 RPS6KC1Q96S38 1066 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 KRT12Q99456 494 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 CELF4Q9BZC1 486 aaKnown RBP17.98■□□□□ 0.47
PTPN20-203ENST00000374342 TRIM7Q9C029 511 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 CARD9Q9H257 536 aa17.98■□□□□ 0.47
PTPN20-203ENST00000374342 CTSHP09668 335 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 RAD23BP54727 409 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 SLC7A5Q01650 507 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
PTPN20-203ENST00000374342 ZNF211Q13398 564 aaPredicted RBP17.97■□□□□ 0.47
PTPN20-203ENST00000374342 LONRF2Q1L5Z9 754 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 FAM228AQ86W67 206 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 CD99L2Q8TCZ2 262 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 FAXDC2Q96IV6 333 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 TWNKQ96RR1 684 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 AP1M1Q9BXS5 423 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 CNTN3Q9P232 1028 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 CDY2AQ9Y6F7 541 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 FRMPD3Q5JV73 1810 aa17.97■□□□□ 0.47
PTPN20-203ENST00000374342 CILPO75339 1184 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 ASGR1P07306 291 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 MYO1EQ12965 1108 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 PTP4A2Q12974 167 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 UBXN11Q5T124 520 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 BEST2Q8NFU1 509 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 HNRNPLLQ8WVV9 542 aaKnown RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 C18orf25Q96B23 403 aaPredicted RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 HINFPQ9BQA5 517 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 WNT8AQ9H1J5 351 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 CYP3A43Q9HB55 503 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 PARP2Q9UGN5 583 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 DMGDHQ9UI17 866 aaKnown RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 TMEM59LQ9UK28 342 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 PCDHGC3Q9UN70 934 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 CEP83Q9Y592 693 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 TRPV2Q9Y5S1 764 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 KRIT1O00522 736 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 PPEF2O14830 753 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 TRPA1O75762 1119 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 FGGP02679 453 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 TWF2Q6IBS0 349 aaKnown RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 DENND1BQ6P3S1 775 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 RSPH3Q86UC2 560 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 REM2Q8IYK8 340 aaPredicted RBP17.96■□□□□ 0.47
PTPN20-203ENST00000374342 SLC4A11Q8NBS3 891 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 TMEM35BQ8NCS4 154 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 CD101Q93033 1021 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 WNT8BQ93098 351 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 VCPIP1Q96JH7 1222 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 ELOVL4Q9GZR5 314 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 KLK14Q9P0G3 267 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 STIM2Q9P246 746 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 SCINQ9Y6U3 715 aa17.96■□□□□ 0.47
PTPN20-203ENST00000374342 MED7O43513 233 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 STAU1O95793 577 aaKnown RBP17.95■□□□□ 0.46
PTPN20-203ENST00000374342 PAEPP09466 180 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 MMP8P22894 467 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
PTPN20-203ENST00000374342 NKX3-2P78367 333 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 PTPN11Q06124 597 aaPredicted RBP17.95■□□□□ 0.46
PTPN20-203ENST00000374342 SMYD5Q6GMV2 418 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 WHAMMQ8TF30 809 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 PLEKHA4Q9H4M7 779 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PTPN20-203ENST00000374342 SRRDQ9UH36 339 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms