RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 TRIM6Q9C030 488 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 SMYD3Q9H7B4 428 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 NOC2LQ9Y3T9 749 aaKnown RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 TRPV2Q9Y5S1 764 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 TARSL2A2RTX5 802 aaKnown RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 CCDC151A5D8V7 595 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 RECQL4O94761 1208 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 PAEPP09466 180 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 P4HA1P13674 534 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 RRM1P23921 792 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 BRD2P25440 801 aaKnown RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 MAP2K2P36507 400 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 BRD3Q15059 726 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 WDR93Q6P2C0 686 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 RSPH3Q86UC2 560 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 USP38Q8NB14 1042 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 RBM12Q9NTZ6 932 aaKnown RBP16.73■□□□□ 0.27
HDAC8-209ENST00000373589 ZNF446Q9NWS9 450 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 TMEM59LQ9UK28 342 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 CDY2AQ9Y6F7 541 aa16.73■□□□□ 0.27
HDAC8-209ENST00000373589 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
HDAC8-209ENST00000373589 CEP104O60308 925 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 CILPO75339 1184 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 COMTP21964 271 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 SSTR3P32745 418 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-209ENST00000373589 CDH5P33151 784 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-209ENST00000373589 RAD23BP54727 409 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
HDAC8-209ENST00000373589 MESDQ14696 234 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 CD101Q93033 1021 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 TSPAN18Q96SJ8 248 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 CARD9Q9H257 536 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 ADAM22Q9P0K1 906 aa16.72■□□□□ 0.27
HDAC8-209ENST00000373589 TTC7AQ9ULT0 858 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-209ENST00000373589 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 M0QZ92 97 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 RPLP2P05387 115 aaKnown RBP16.71■□□□□ 0.27
HDAC8-209ENST00000373589 KCNE1P15382 129 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 MMP8P22894 467 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 AKAP5P24588 427 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 MGAT3Q09327 533 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 INCA1Q0VD86 236 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 DCAF12L1Q5VU92 463 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 PCSK9Q8NBP7 692 aaKnown RBP16.71■□□□□ 0.27
HDAC8-209ENST00000373589 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
HDAC8-209ENST00000373589 BEST2Q8NFU1 509 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 PXYLP1Q8TE99 480 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 BTBD6Q96KE9 485 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 TWNKQ96RR1 684 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.274e-6■■■□□ 15.2
HDAC8-209ENST00000373589 C11orf70Q9BRQ4 267 aa16.71■□□□□ 0.27
HDAC8-209ENST00000373589 SENP6Q9GZR1 1112 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-209ENST00000373589 DDX20Q9UHI6 824 aaKnown RBP16.71■□□□□ 0.27
HDAC8-209ENST00000373589 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 GNRH1P01148 92 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 CHRNA1P02708 482 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 VSNL1P62760 191 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 C2CD6Q53TS8 623 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 FAM47CQ5HY64 1035 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 LIN9Q5TKA1 542 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 PLEKHA7Q6IQ23 1121 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 WDTC1Q8N5D0 677 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 LRRC52Q8N7C0 313 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 SLC4A11Q8NBS3 891 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TMEM35BQ8NCS4 154 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 HNRNPLLQ8WVV9 542 aaKnown RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 ALG3Q92685 438 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 C18orf25Q96B23 403 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 ELOVL4Q9GZR5 314 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TUBGCP4Q9UGJ1 667 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 IPPQ9Y573 584 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TMEM110-MUSTN1A8MSY1 372 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 PEX5P50542 639 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 RNASE9P60153 205 aaKnown RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TNNC1P63316 161 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 MYO1EQ12965 1108 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TTC39CQ8N584 583 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TMEM176AQ96HP8 235 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 LRRC1Q9BTT6 524 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 APOL6Q9BWW8 343 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 LHX5Q9H2C1 402 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 ANAPC7Q9UJX3 599 aa16.7■□□□□ 0.26
HDAC8-209ENST00000373589 BARX2Q9UMQ3 279 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-209ENST00000373589 TRIP11Q15643 1979 aa16.69■□□□□ 0.26
HDAC8-209ENST00000373589 PPEF2O14830 753 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms