RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 RLN3Q8WXF3 142 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CEP170P1Q96L14 293 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 NUSAP1Q9BXS6 441 aaKnown RBP13.55□□□□□ -0.24
HDAC8-204ENST00000373560 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 YIPF1Q9Y548 306 aa13.55□□□□□ -0.24
HDAC8-204ENST00000373560 PTPN13Q12923 2485 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
HDAC8-204ENST00000373560 ZBTB39O15060 712 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 SH3BP5O60239 455 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 THP07101 528 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC8-204ENST00000373560 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 TMEFF1Q8IYR6 380 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 E2F7Q96AV8 911 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-204ENST00000373560 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-204ENST00000373560 FBXL5Q9UKA1 691 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
HDAC8-204ENST00000373560 OBSL1O75147 1896 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 HIP1O00291 1037 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 TDP2O95551 362 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 CFIP05156 583 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 EDN1P05305 212 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 ARSAP15289 507 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 ABCG1P45844 678 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 PSMC5P62195 406 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-204ENST00000373560 TRIP6Q15654 476 aaKnown RBP13.53□□□□□ -0.24
HDAC8-204ENST00000373560 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 SLC23A3Q6PIS1 610 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
HDAC8-204ENST00000373560 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 MDGA1Q8NFP4 955 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 BPIFB1Q8TDL5 484 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-204ENST00000373560 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 PRORYQ9H606 182 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
HDAC8-204ENST00000373560 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.24
HDAC8-204ENST00000373560 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-204ENST00000373560 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 SMAPO00193 183 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 ITPKAP23677 461 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
HDAC8-204ENST00000373560 GALK1P51570 392 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 CYP4F8P98187 520 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 RASSF3Q86WH2 238 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 ELMOD1Q8N336 334 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 HDDC3Q8N4P3 179 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-204ENST00000373560 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 CLMPQ9H6B4 373 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.25
HDAC8-204ENST00000373560 PTPRQQ9UMZ3 2332 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 TSC2P49815 1807 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 OPHN1O60890 802 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 CDC27P30260 824 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 RFC5P40937 340 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 LIFRP42702 1097 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 MCM2P49736 904 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 UPP1Q16831 310 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 USP39Q53GS9 565 aaKnown RBP13.51□□□□□ -0.25
HDAC8-204ENST00000373560 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 TSTD1Q8NFU3 115 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 ETNPPLQ8TBG4 499 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
HDAC8-204ENST00000373560 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 OSBPL3Q9H4L5 887 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 COL12A1Q99715 3063 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 SPTA1P02549 2419 aa13.51□□□□□ -0.25
HDAC8-204ENST00000373560 MGAQ8IWI9 3026 aa13.5□□□□□ -0.25
HDAC8-204ENST00000373560 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
HDAC8-204ENST00000373560 TNFRSF10BO14763 440 aa13.5□□□□□ -0.25
HDAC8-204ENST00000373560 SOAT2O75908 522 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms