RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 HDAC11Q96DB2 347 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 FAM198AQ9UFP1 575 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ARMCX3Q9UH62 379 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 TMCO1Q9UM00 188 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ANKRD31Q8N7Z5 1873 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 LGALS16A8MUM7 142 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 CYP27A1Q02318 531 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SLC9A5Q14940 896 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 E4F1Q66K89 784 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 DEFB129Q9H1M3 183 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 SEPT9Q9UHD8 586 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 DPYDQ12882 1025 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PRAMEF18Q5VWM3 479 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 GMCL1Q96IK5 515 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ZNF184Q99676 751 aaPredicted RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 IDI2Q9BXS1 227 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 ADD3Q9UEY8 706 aaKnown RBP6.92□□□□□ -1.3
CHD6-203ENST00000373233 STOML2Q9UJZ1 356 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 AFG3L2Q9Y4W6 797 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
CHD6-203ENST00000373233 KLHL33A6NCF5 533 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 VWA5AO00534 786 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 POLR2EP19388 210 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 RPS6P62753 249 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 KDSRQ06136 332 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PDIA5Q14554 519 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PROM2Q8N271 834 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 DCLK2Q8N568 766 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 GJA10Q969M2 543 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 MRIQ9BWK5 157 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ACAD9Q9H845 621 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 FAM153AQ9UHL3 310 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 TNNC2P02585 160 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 GSNP06396 782 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 LRRC63Q05C16 580 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ADAM9Q13443 819 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 CNGA2Q16280 664 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 GALNT4Q8N4A0 578 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ELP3Q9H9T3 547 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 CACYBPQ9HB71 228 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 RAB20Q9NX57 234 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 BTN3A3O00478 584 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 RASSF9O75901 435 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 CCT3P49368 545 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 POLGP54098 1239 aaPredicted RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 CCDC153Q494R4 210 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 CENPUQ71F23 418 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 FAM20AQ96MK3 541 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PCDHAC2Q9Y5I4 1007 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 KRT36O76013 467 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ARFIP2P53365 341 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 MTMR1Q13613 665 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 TRIP13Q15645 432 aaPredicted RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 PSPC1Q8WXF1 523 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 MTBPQ96DY7 904 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 KLHL4Q9C0H6 718 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 KLC2Q9H0B6 622 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PRDM16Q9HAZ2 1276 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 HBS1LQ9Y450 684 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 CCNE1P24864 410 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ALDH18A1P54886 795 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 DNAL1Q4LDG9 190 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PPP6R3Q5H9R7 873 aaPredicted RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 MARK2Q7KZI7 788 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 ELOA2Q8IYF1 753 aaPredicted RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 GRAMD1AQ96CP6 724 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 NLRP4Q96MN2 994 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 NFIBO00712 420 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 IL12RB1P42701 662 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 PRCPP42785 496 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 RBM43Q6ZSC3 357 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 NCLNQ969V3 563 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 SYNGAP1Q96PV0 1343 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 DCUN1D5Q9BTE7 237 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 MLXIPQ9HAP2 919 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 DDX56Q9NY93 547 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 KLRG2A4D1S0 409 aaPredicted RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 C4BPBP20851 252 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 TARSP26639 723 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 PUDPQ08623 228 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 RALGDSQ12967 914 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 THOC5Q13769 683 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 B3GNT6Q6ZMB0 384 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 DEPTORQ8TB45 409 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 NOC2LQ9Y3T9 749 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 C16orf96A6NNT2 1141 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 ENO1P06733 434 aaKnown RBP6.91□□□□□ -1.3
CHD6-203ENST00000373233 PSMC6P62333 389 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 MCL1Q07820 350 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 NR1D2Q14995 579 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 SGO2Q562F6 1265 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 RNF19BQ6ZMZ0 732 aa6.91□□□□□ -1.3
CHD6-203ENST00000373233 GABPB2Q8TAK5 448 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms