RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 GPR88Q9GZN0 384 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 ADAM28Q9UKQ2 775 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
TMEM53-204ENST00000372243 PRG3Q9Y2Y8 225 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-204ENST00000372243 F8VZ95 297 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 HUS1O60921 280 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 TADA2AO75478 443 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 ITGB1P05556 798 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 ACO1P21399 889 aaKnown RBP16.96■□□□□ 0.31
TMEM53-204ENST00000372243 IGFBP6P24592 240 aaPredicted RBP16.96■□□□□ 0.31
TMEM53-204ENST00000372243 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 SOWAHAQ2M3V2 549 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 TIGD5Q53EQ6 642 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 KCNT2Q6UVM3 1135 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 DSTYKQ6XUX3 929 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 TC2NQ8N9U0 490 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 SPATA18Q8TC71 538 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 ZNF558Q96NG5 402 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 AAASQ9NRG9 546 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 MARCH5Q9NX47 278 aa16.96■□□□□ 0.31
TMEM53-204ENST00000372243 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
TMEM53-204ENST00000372243 LRRC53A6NM62 1247 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 CYB561D2O14569 222 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 CYP11A1P05108 521 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 HNRNPH3P31942 346 aaKnown RBP16.95■□□□□ 0.3
TMEM53-204ENST00000372243 STAT1P42224 750 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 INCA1Q0VD86 236 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 ELAVL2Q12926 359 aaKnown RBP16.95■□□□□ 0.3
TMEM53-204ENST00000372243 SPOUT1Q5T280 376 aaKnown RBP16.95■□□□□ 0.3
TMEM53-204ENST00000372243 COLGALT1Q8NBJ5 622 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 OR8K1Q8NGG5 319 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 L1RE1Q9UN81 338 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 KIAA1671Q9BY89 1806 aa16.95■□□□□ 0.3
TMEM53-204ENST00000372243 F8W810 466 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 FOXN3O00409 490 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-204ENST00000372243 EFEMP2O95967 443 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 WEE2P0C1S8 567 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 LINC00271P0C7V0 271 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 ODC1P11926 461 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 TYMPP19971 482 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SOX5P35711 763 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PPM1AP35813 382 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 BRCC3P46736 316 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 ADKP55263 362 aaKnown RBP16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SCARA5Q6ZMJ2 495 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 FAM71AQ8IYT1 594 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SLC39A11Q8N1S5 342 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 HASPINQ8TF76 798 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 IGSF21Q96ID5 467 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 ABHD10Q9NUJ1 306 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 AIPL1Q9NZN9 384 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 DSEQ9UL01 958 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 BARX2Q9UMQ3 279 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 RWDD3Q9Y3V2 267 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.3
TMEM53-204ENST00000372243 CEP290O15078 2479 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SYN3O14994 580 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 CILPO75339 1184 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 CCDC172P0C7W6 258 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 WARSP23381 471 aaKnown RBP16.94■□□□□ 0.3
TMEM53-204ENST00000372243 CDH8P55286 799 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 SFMBT2Q5VUG0 894 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 UNC93AQ86WB7 457 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PDCL2Q8N4E4 241 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 KBTBD7Q8WVZ9 684 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PANX2Q96RD6 677 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 STK39Q9UEW8 545 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PCDHB12Q9Y5F1 795 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 PCDHA11Q9Y5I1 949 aa16.94■□□□□ 0.3
TMEM53-204ENST00000372243 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 NT5C1B-RDH14C9J2C7 533 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 GABRDO14764 452 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 FERP16591 822 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 CD58P19256 250 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 PBX3P40426 434 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 RAP1GAPP47736 663 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 LHX1P48742 406 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 TSC2P49815 1807 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 TMEM173Q86WV6 379 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 RNF168Q8IYW5 571 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 ADGRF2Q8IZF7 708 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 MRPL45Q9BRJ2 306 aaKnown RBP16.93■□□□□ 0.3
TMEM53-204ENST00000372243 SPG21Q9NZD8 308 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
TMEM53-204ENST00000372243 LCHNA4D1U4 455 aa16.92■□□□□ 0.3
TMEM53-204ENST00000372243 LINC01553A4QN01 128 aa16.92■□□□□ 0.3
TMEM53-204ENST00000372243 ZNF132P52740 706 aa16.92■□□□□ 0.3
TMEM53-204ENST00000372243 MLLT1Q03111 559 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms