RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 UVRAGQ9P2Y5 699 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 ST3GAL5Q9UNP4 418 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 SCN1AP35498 2009 aa18.69■□□□□ 0.58
SSBP3-203ENST00000371319 PPEF2O14830 753 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 DDX3YO15523 660 aaKnown RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 MYBL1P10243 752 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 KCNE1P15382 129 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 H2AFXP16104 143 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 NSFP46459 744 aaKnown RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 RAD23BP54727 409 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PTP4A2Q12974 167 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ITGA7Q13683 1181 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 GLRA4Q5JXX5 417 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 LHX8Q68G74 356 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PHF13Q86YI8 300 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ARRDC4Q8NCT1 418 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 SLAIN1Q8ND83 568 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ZNF564Q8TBZ8 553 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 TRIM11Q96F44 468 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ELOVL4Q9GZR5 314 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ANKZF1Q9H8Y5 726 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 RNF14Q9UBS8 474 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PARP2Q9UGN5 583 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PCDHGC3Q9UN70 934 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 SMIM28A0A1B0GU29 152 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 CILPO75339 1184 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 RPS6KA5O75582 802 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PAEPP09466 180 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 P4HA1P13674 534 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 YY1P25490 414 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 ITIH3Q06033 890 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PTPN11Q06124 597 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 C2orf54Q08AI8 447 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 TRIM71Q2Q1W2 868 aaKnown RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 PBKQ96KB5 322 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 TWNKQ96RR1 684 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 TSPAN18Q96SJ8 248 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 OSBPL7Q9BZF2 842 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 SAGE1Q9NXZ1 904 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 HMGXB4Q9UGU5 601 aa18.68■□□□□ 0.58
SSBP3-203ENST00000371319 UBQLN1Q9UMX0 589 aaKnown RBP18.68■□□□□ 0.58
SSBP3-203ENST00000371319 KCNK3O14649 394 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 LSM8O95777 96 aaKnown RBP18.67■□□□□ 0.58
SSBP3-203ENST00000371319 RRM1P23921 792 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 CDH5P33151 784 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-203ENST00000371319 THPOP40225 353 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 PRMT2P55345 433 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 INCA1Q0VD86 236 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 PTK7Q13308 1070 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 CCDC181Q5TID7 509 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 C9orf57Q5W0N0 161 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 TWF2Q6IBS0 349 aaKnown RBP18.67■□□□□ 0.58
SSBP3-203ENST00000371319 PPP1R2P3Q6NXS1 205 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 FBXO38Q6PIJ6 1188 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 SLC4A11Q8NBS3 891 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 MSANTD4Q8NCY6 345 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 ERVK-5Q9HDB9 667 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 TRMT13Q9NUP7 481 aaKnown RBP18.67■□□□□ 0.58
SSBP3-203ENST00000371319 ALG6Q9Y672 507 aa18.67■□□□□ 0.58
SSBP3-203ENST00000371319 TMEM110-MUSTN1A8MSY1 372 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 PAFAH1B1P43034 410 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 TNNC1P63316 161 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 MYO1EQ12965 1108 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 CFAP221Q4G0U5 840 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 LLGL2Q6P1M3 1020 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 WDTC1Q8N5D0 677 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 LRRC52Q8N7C0 313 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 SPATA4Q8NEY3 305 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 VCPIP1Q96JH7 1222 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 BTBD6Q96KE9 485 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 C11orf70Q9BRQ4 267 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 TSEN34Q9BSV6 310 aaKnown RBP18.66■□□□□ 0.58
SSBP3-203ENST00000371319 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 FAM124BQ9H5Z6 455 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-203ENST00000371319 AGO3Q9H9G7 860 aaKnown RBP18.66■□□□□ 0.58
SSBP3-203ENST00000371319 CHST12Q9NRB3 414 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 ADAM22Q9P0K1 906 aa18.66■□□□□ 0.58
SSBP3-203ENST00000371319 MOXD2PA6NHM9 499 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 PIRO00625 290 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
SSBP3-203ENST00000371319 ORC1Q13415 861 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 MESDQ14696 234 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 C2CD6Q53TS8 623 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 FAM26DQ5JW98 314 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 FBXO47Q5MNV8 452 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 DENND1BQ6P3S1 775 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 MMS22LQ6ZRQ5 1243 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 MMGT1Q8N4V1 131 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 C1orf131Q8NDD1 294 aaKnown RBP18.65■□□□□ 0.58
SSBP3-203ENST00000371319 RPS6KC1Q96S38 1066 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 HMX1Q9NP08 348 aaPredicted RBP18.65■□□□□ 0.58
SSBP3-203ENST00000371319 BARX2Q9UMQ3 279 aaPredicted RBP18.65■□□□□ 0.58
SSBP3-203ENST00000371319 PTCH2Q9Y6C5 1203 aa18.65■□□□□ 0.58
SSBP3-203ENST00000371319 TLR3O15455 904 aaKnown RBP18.64■□□□□ 0.58
SSBP3-203ENST00000371319 RHOXF2BP0C7M4 288 aa18.64■□□□□ 0.58
SSBP3-203ENST00000371319 CD19P15391 556 aa18.64■□□□□ 0.58
SSBP3-203ENST00000371319 COMTP21964 271 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms