RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 NT5DC4Q86YG4 428 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 CCDC50Q8IVM0 306 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 OR2W6PQ8NHA6 318 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 TRPM4Q8TD43 1214 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 FNIP1Q8TF40 1166 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
TPM3-209ENST00000368527 ZNF606Q8WXB4 792 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 CPA5Q8WXQ8 436 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
TPM3-209ENST00000368527 PCYT2Q99447 389 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 NCAPGQ9BPX3 1015 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 EPB41L4BQ9H329 900 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 CYP3A43Q9HB55 503 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 PRMT7Q9NVM4 692 aaPredicted RBP10.84□□□□□ -0.67
TPM3-209ENST00000368527 CPSF3Q9UKF6 684 aaKnown RBP10.84□□□□□ -0.67
TPM3-209ENST00000368527 KIAA1257Q9ULG3 409 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 NUB1Q9Y5A7 615 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 MYH9P35579 1960 aaKnown RBP10.84□□□□□ -0.67
TPM3-209ENST00000368527 WDR90Q96KV7 1748 aa10.84□□□□□ -0.67
TPM3-209ENST00000368527 COL1A2P08123 1366 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 ABCB7O75027 752 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 TTC4O95801 387 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 GHRP10912 638 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 PROZP22891 400 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 ADCY8P40145 1251 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 PHKA2P46019 1235 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 CNTN2Q02246 1040 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 PPIL2Q13356 520 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 ITIH4Q14624 930 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 RASA2Q15283 850 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 DCUN1D2Q6PH85 259 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 ANKRD13AQ8IZ07 590 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 ZDHHC14Q8IZN3 488 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 RAPGEF5Q92565 580 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 CABS1Q96KC9 395 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 BTBD6Q96KE9 485 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 CFAP57Q96MR6 1250 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 GPR20Q99678 358 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 FZD8Q9H461 694 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 EFCC1Q9HA90 598 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 APOBEC3GQ9HC16 384 aaKnown RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 UBN1Q9NPG3 1134 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 PPANQ9NQ55 473 aaKnown RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
TPM3-209ENST00000368527 SENP1Q9P0U3 644 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 LGALS13Q9UHV8 139 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 AGTPBP1Q9UPW5 1226 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 KCNH4Q9UQ05 1017 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 TNFSF13BQ9Y275 285 aa10.83□□□□□ -0.68
TPM3-209ENST00000368527 SPDYE5A6NIY4 337 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 FAM189A1O60320 539 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 CDH16O75309 829 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 MCF2P10911 925 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 RALAP11233 206 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 TSHRP16473 764 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 DESP17661 470 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 SNX16P57768 344 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 TTLL4Q14679 1199 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 MORF4L2Q15014 288 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 STILQ15468 1287 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ZNF699Q32M78 642 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 AADACL2Q6P093 401 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 C6orf89Q6UWU4 347 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 PPP1R21Q6ZMI0 780 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 GADL1Q6ZQY3 521 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 MMS22LQ6ZRQ5 1243 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ERICH1Q86X53 443 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ZCCHC9Q8N567 271 aaKnown RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 CCDC197Q8NCU1 140 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ATXN2LQ8WWM7 1075 aaKnown RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 NKD2Q969F2 451 aaPredicted RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 CCDC114Q96M63 670 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 HAPLN2Q9GZV7 340 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 CDC42EP4Q9H3Q1 356 aaKnown RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 ASB7Q9H672 318 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 CISHQ9NSE2 258 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 SAMD15Q9P1V8 674 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 BTBD7Q9P203 1132 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 PPP1R1BQ9UD71 204 aaPredicted RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 FETUBQ9UGM5 382 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 SCAF8Q9UPN6 1271 aaKnown RBP10.82□□□□□ -0.68
TPM3-209ENST00000368527 PTPN22Q9Y2R2 807 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
TPM3-209ENST00000368527 DNAJC25-GNG10A0A024R161 153 aa10.81□□□□□ -0.68
TPM3-209ENST00000368527 TCRBV7S2A1N4TA0A589 114 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms