RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 ACRBPQ8NEB7 543 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 BCO2Q9BYV7 579 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 SMYD3Q9H7B4 428 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 CYP3A43Q9HB55 503 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 LZTFL1Q9NQ48 299 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 SCN1AP35498 2009 aa17■□□□□ 0.31
LMNA-203ENST00000368297 RPL9P32969 192 aaKnown RBP17■□□□□ 0.31
LMNA-203ENST00000368297 PDE6CP51160 858 aa17■□□□□ 0.31
LMNA-203ENST00000368297 CLCNKBP51801 687 aa17■□□□□ 0.31
LMNA-203ENST00000368297 CDH8P55286 799 aa17■□□□□ 0.31
LMNA-203ENST00000368297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17■□□□□ 0.316e-6■□□□□ 8.1
LMNA-203ENST00000368297 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
LMNA-203ENST00000368297 UBR7Q8N806 425 aa17■□□□□ 0.31
LMNA-203ENST00000368297 FAM193BQ96PV7 902 aaPredicted RBP17■□□□□ 0.31
LMNA-203ENST00000368297 SDCBP2Q9H190 292 aa17■□□□□ 0.31
LMNA-203ENST00000368297 SEPT11Q9NVA2 429 aaKnown RBP17■□□□□ 0.31
LMNA-203ENST00000368297 KANSL3Q9P2N6 904 aa17■□□□□ 0.31
LMNA-203ENST00000368297 MYO1AQ9UBC5 1043 aa17■□□□□ 0.31
LMNA-203ENST00000368297 KPNA7A9QM74 516 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 UPP2O95045 317 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 PFKMP08237 780 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 ACRP10323 421 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 BPIFB4P59827 614 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 KIAA1328Q86T90 577 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 SLC47A2Q86VL8 602 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 RABGGTAQ92696 567 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 VWCEQ96DN2 955 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 DDX27Q96GQ7 796 aaKnown RBP16.99■□□□□ 0.31
LMNA-203ENST00000368297 UROC1Q96N76 676 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 PCDH10Q9P2E7 1040 aa16.99■□□□□ 0.31
LMNA-203ENST00000368297 ABHD14A-ACY1A0A1B0GW23 586 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 SPTLC1O15269 473 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 TNFAIP3P21580 790 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 GTF2F1P35269 517 aaKnown RBP eCLIP16.98■□□□□ 0.31
LMNA-203ENST00000368297 GATMP50440 423 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 LILRA4P59901 499 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
LMNA-203ENST00000368297 ZNF394Q53GI3 561 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 TAF3Q5VWG9 929 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 ZNF662Q6ZS27 426 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 SLC20A1Q8WUM9 679 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 AGPAT1Q99943 283 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 HTATIP2Q9BUP3 242 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 ACP6Q9NPH0 428 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 TBC1D13Q9NVG8 400 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
LMNA-203ENST00000368297 CALCAP01258 141 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 AMHP03971 560 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 CYP11B1P15538 503 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 ANXA13P27216 316 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 PPIGQ13427 754 aaKnown RBP eCLIP16.97■□□□□ 0.311e-8■■■□□ 15.5
LMNA-203ENST00000368297 UPP1Q16831 310 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 TTC39CQ8N584 583 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 EPS8L1Q8TE68 723 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 TSGA10Q9BZW7 698 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 GDAP2Q9NXN4 497 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 PUF60Q9UHX1 559 aaKnown RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 TTC3P53804 2025 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 LTBP2Q14767 1821 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 TBKBP1A7MCY6 615 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 DYNC1I1O14576 645 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 KRT86O43790 486 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 HUS1O60921 280 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 EFCAB14O75071 495 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 GNA15P30679 374 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 ASTE1Q2TB18 679 aaPredicted RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 DSTYKQ6XUX3 929 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 ZNF280BQ86YH2 543 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 GLYCTKQ8IVS8 523 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 APPL2Q8NEU8 664 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 BADQ92934 168 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 CASD1Q96PB1 797 aa16.97■□□□□ 0.31
LMNA-203ENST00000368297 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 NOCTQ9UK39 431 aaKnown RBP16.97■□□□□ 0.31
LMNA-203ENST00000368297 A0A087X0T9 212 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 CYB561D2O14569 222 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 THAP12O43422 761 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 DDHD2O94830 711 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 FAM228BP0C875 321 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 ZNF132P52740 706 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 FPGSQ05932 587 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 SLC18A3Q16572 532 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 SMYD5Q6GMV2 418 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 LNX1Q8TBB1 728 aaPredicted RBP16.96■□□□□ 0.31
LMNA-203ENST00000368297 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 MRPL45Q9BRJ2 306 aaKnown RBP16.96■□□□□ 0.31
LMNA-203ENST00000368297 MRPL9Q9BYD2 267 aaKnown RBP16.96■□□□□ 0.31
LMNA-203ENST00000368297 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
LMNA-203ENST00000368297 FAM124BQ9H5Z6 455 aaPredicted RBP16.96■□□□□ 0.31
LMNA-203ENST00000368297 BARX2Q9UMQ3 279 aaPredicted RBP16.96■□□□□ 0.31
LMNA-203ENST00000368297 CILPO75339 1184 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms