RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZNF461Q8TAF7 563 aa24.18■■□□□ 1.46
ECHDC1-203ENST00000368291 ZNF707Q96C28 371 aaPredicted RBP24.18■■□□□ 1.46
ECHDC1-203ENST00000368291 POMKQ9H5K3 350 aa24.18■■□□□ 1.46
ECHDC1-203ENST00000368291 LMBRD1Q9NUN5 540 aa24.18■■□□□ 1.46
ECHDC1-203ENST00000368291 SPDYE4A6NLX3 237 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 LRRIQ3A6PVS8 624 aaPredicted RBP24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 CYB561D2O14569 222 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 AKAP3O75969 853 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 CST3P01034 146 aaPredicted RBP24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 KRT19P08727 400 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 PMS1P54277 932 aaKnown RBP24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 DLG4P78352 724 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 RBP5P82980 135 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 OVOS1Q6IE37 1185 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 C15orf39Q6ZRI6 1047 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 ADSSL1Q8N142 457 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 PHF7Q9BWX1 381 aaPredicted RBP24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 ZDHHC7Q9NXF8 308 aa24.17■■□□□ 1.46
ECHDC1-203ENST00000368291 CD44P16070 742 aaKnown RBP24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 MTHFRP42898 656 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ARPP19P56211 112 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 MORC3Q14149 939 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 EDRF1Q3B7T1 1238 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 WSCD1Q658N2 575 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 USP37Q86T82 979 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 RTP3Q9BQQ7 232 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 RHOBTB2Q9BYZ6 727 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 DOCK8Q8NF50 2099 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 MYO10Q9HD67 2058 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 MAPK13O15264 365 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 C8AP07357 584 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ATF2P15336 505 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 BFSP1Q12934 665 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ADAM9Q13443 819 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 CAMK4Q16566 473 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ATAT1Q5SQI0 421 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 C1orf220Q5T0J3 134 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ELMSAN1Q6PJG2 1045 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 RIPOR3Q96MK2 946 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 NECTIN4Q96NY8 510 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 TMEM209Q96SK2 561 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 GTPBP4Q9BZE4 634 aaKnown RBP24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 GDAP2Q9NXN4 497 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 FRMD4BQ9Y2L6 1034 aa24.16■■□□□ 1.46
ECHDC1-203ENST00000368291 ARHGEF37A1IGU5 675 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 BIN1O00499 593 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 VNN2O95498 520 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 OR4Q2P0C623 313 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 ANKRD40Q6AI12 368 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 GJD3Q8N144 294 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 OR10T2Q8NGX3 314 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 SLC7A14Q8TBB6 771 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 TMC2Q8TDI7 906 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 EEF2KMTQ96G04 330 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 OXCT2Q9BYC2 517 aaPredicted RBP24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 PRKD2Q9BZL6 878 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 DSEQ9UL01 958 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 L1RE1Q9UN81 338 aa24.15■■□□□ 1.46
ECHDC1-203ENST00000368291 CUL9Q8IWT3 2517 aa24.14■■□□□ 1.46
ECHDC1-203ENST00000368291 TRIM49BA6NDI0 452 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 OR6C75A6NL08 312 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 LOC730098B7Z3J9 87 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 SEC24AO95486 1093 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 C4BPAP04003 597 aaKnown RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 RPL13P26373 211 aaKnown RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 MCCD1P59942 119 aaPredicted RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 UVSSAQ2YD98 709 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 LIN9Q5TKA1 542 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 TDRD10Q5VZ19 366 aaKnown RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 TPGS2Q68CL5 300 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 CYP26C1Q6V0L0 522 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 RNF19BQ6ZMZ0 732 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 ZC3H3Q8IXZ2 948 aaKnown RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 SMG7Q92540 1137 aaKnown RBP24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 HPDLQ96IR7 371 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 KIAA1468Q9P260 1216 aa24.14■■□□□ 1.45
ECHDC1-203ENST00000368291 PPP1R3GB7ZBB8 358 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 CPB1P15086 417 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 HOXA9P31269 272 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 PPM1LQ5SGD2 360 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 LIMS2Q7Z4I7 341 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 PDCL2Q8N4E4 241 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 AFF4Q9UHB7 1163 aaKnown RBP24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 SNX9Q9Y5X1 595 aa24.13■■□□□ 1.45
ECHDC1-203ENST00000368291 TNFRSF10AO00220 468 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 HNRNPA1P09651 372 aaKnown RBP eCLIP24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 PSMC2P35998 433 aaKnown RBP24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 MYO1EQ12965 1108 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 SOWAHAQ2M3V2 549 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 RTL10Q7L3V2 364 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 FAM186BQ8IYM0 893 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 TCEAL8Q8IYN2 117 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 KHSRPQ92945 711 aaKnown RBP eCLIP24.12■■□□□ 1.452e-12■■■□□ 17
ECHDC1-203ENST00000368291 RPGRIP1Q96KN7 1286 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 GBP4Q96PP9 640 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 XYLT2Q9H1B5 865 aa24.12■■□□□ 1.45
ECHDC1-203ENST00000368291 BDP1A6H8Y1 2624 aa24.11■■□□□ 1.45
ECHDC1-203ENST00000368291 HUS1O60921 280 aa24.11■■□□□ 1.45
ECHDC1-203ENST00000368291 VNN1O95497 513 aa24.11■■□□□ 1.45
ECHDC1-203ENST00000368291 CCNE1P24864 410 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms