RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ICA1LQ8NDH6 482 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ISCUQ9H1K1 167 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ERAP1Q9NZ08 941 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ATP11BQ9Y2G3 1177 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 H3BRJ5 948 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PIK3R2O00459 728 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 NFIBO00712 420 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 MYCP01106 439 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 KRT8P05787 483 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 WEE2P0C1S8 567 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PAMP19021 973 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 KCNJ1P48048 391 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PSMC6P62333 389 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 AP1B1Q10567 949 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 KLC3Q6P597 504 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PNKPQ96T60 521 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 MCM8Q9UJA3 840 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 APOL1O14791 398 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 CDH16O75309 829 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 LCP1P13796 627 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 XPAP23025 273 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 RGS7P49802 495 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 HERVK_113P62684 666 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 EFCAB12Q6NXP0 572 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 FSD1LQ9BXM9 530 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 DDX28Q9NUL7 540 aaKnown RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 F5H423 210 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PRLRP16471 622 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 KCNA4P22459 653 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 CXCL9Q07325 125 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 P3H1Q32P28 736 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 PAPD7Q5XG87 772 aaKnown RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 APOBEC3HQ6NTF7 200 aaKnown RBP13.92□□□□□ -0.18
PTPRK-204ENST00000368210 ARL10Q8N8L6 244 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 SH3GL2Q99962 352 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 OLFML3Q9NRN5 406 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 SENP1Q9P0U3 644 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 ZFP69BQ9UJL9 534 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 E2F6O75461 281 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 IL18RAPO95256 599 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 NPTX2P47972 431 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 SAMD3Q8N6K7 520 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 OR2W6PQ8NHA6 318 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 CYP2W1Q8TAV3 490 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 ZIM3Q96PE6 472 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 SERPINI1Q99574 410 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 DCTN4Q9UJW0 460 aa13.92□□□□□ -0.18
PTPRK-204ENST00000368210 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 ARL2BPQ9Y2Y0 163 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 DAB1O75553 588 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 GTF2H1P32780 548 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 TCF7P36402 384 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-204ENST00000368210 PTGISQ16647 500 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 TRPM8Q7Z2W7 1104 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 PPWD1Q96BP3 646 aaKnown RBP13.91□□□□□ -0.18
PTPRK-204ENST00000368210 NUDT12Q9BQG2 462 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 IDI2Q9BXS1 227 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 TNPO2O14787 897 aaKnown RBP13.91□□□□□ -0.18
PTPRK-204ENST00000368210 MMP14P50281 582 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 DDR1Q08345 913 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 FAM83AQ86UY5 434 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 ANKMY2Q8IV38 441 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 PACSIN1Q9BY11 444 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 IL1RAPL1Q9NZN1 696 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-204ENST00000368210 C1orf146Q5VVC0 180 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 PID1Q7Z2X4 250 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 RASSF3Q86WH2 238 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 DUSP9Q99956 384 aaKnown RBP13.91□□□□□ -0.18
PTPRK-204ENST00000368210 PDCD2LQ9BRP1 358 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 SIK2Q9H0K1 926 aa13.91□□□□□ -0.18
PTPRK-204ENST00000368210 SUPT3HO75486 399 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 VCAM1P19320 739 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 GJA8P48165 433 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 SYTL5Q8TDW5 730 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-204ENST00000368210 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-204ENST00000368210 TTC4O95801 387 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 RARBP10826 455 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
PTPRK-204ENST00000368210 ART3Q13508 389 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 ITPRIPL1Q6GPH6 555 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 ACAD10Q6JQN1 1059 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 NT5C1AQ9BXI3 368 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 SLC13A1Q9BZW2 595 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 APOBEC2Q9Y235 224 aaKnown RBP13.9□□□□□ -0.18
PTPRK-204ENST00000368210 VHLP40337 213 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 TRPC1P48995 793 aa13.9□□□□□ -0.18
PTPRK-204ENST00000368210 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-204ENST00000368210 PCNX4Q63HM2 1172 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms