RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RBM15Q96T37 977 aaKnown RBP eCLIP15.13■□□□□ 0.01
CD48-201ENST00000368045 HAPLN2Q9GZV7 340 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 FGFR1OP2Q9NVK5 253 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 DDX56Q9NY93 547 aaKnown RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 TPX2Q9ULW0 747 aaKnown RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 PPME1Q9Y570 386 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 GSTTP1A0A1W2PQM5 241 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 CFHP08603 1231 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 CD58P19256 250 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 ATP4AP20648 1035 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 STX2P32856 288 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 SSR1P43307 286 aaKnown RBP15.13■□□□□ 0.01
CD48-201ENST00000368045 VPS41P49754 854 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 SLC18A1P54219 525 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 SP4Q02446 784 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 LRRC14Q15048 493 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 STXBP2Q15833 593 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 WLSQ5T9L3 541 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 ANKS1BQ7Z6G8 1248 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 BRSK2Q8IWQ3 736 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 ANKRD42Q8N9B4 389 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 CTNNAL1Q9UBT7 734 aa15.13■□□□□ 0.01
CD48-201ENST00000368045 KRT1P04264 644 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 GSCP56915 257 aaPredicted RBP15.12■□□□□ 0.01
CD48-201ENST00000368045 TGFB2P61812 414 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 IL9RQ01113 521 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 MORF4L2Q15014 288 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 RASA2Q15283 850 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 P3H1Q32P28 736 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 C2CD6Q53TS8 623 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 NUGGCQ68CJ6 796 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 DNAJC24Q6P3W2 148 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 ALLCQ8N6M5 410 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 NIPA2Q8N8Q9 360 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 TMEM35BQ8NCS4 154 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 ZNF606Q8WXB4 792 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 MAML1Q92585 1016 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
CD48-201ENST00000368045 FRMD8P1Q9BZ68 369 aaPredicted RBP15.12■□□□□ 0.01
CD48-201ENST00000368045 PHACTR1Q9C0D0 580 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 CD248Q9HCU0 757 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 NRBP2Q9NSY0 501 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 ABCF3Q9NUQ8 709 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 DNAJC17Q9NVM6 304 aaKnown RBP15.12■□□□□ 0.01
CD48-201ENST00000368045 PRKAG3Q9UGI9 489 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 FBXO40Q9UH90 709 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 USTQ9Y2C2 406 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 TELO2Q9Y4R8 837 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 PARP14Q460N5 1801 aa15.12■□□□□ 0.01
CD48-201ENST00000368045 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 ADCY3O60266 1144 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 ASS1P00966 412 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 CREB1P16220 341 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 EFNA5P52803 228 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 PIGHQ14442 188 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 SURF1Q15526 300 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 SPOCD1Q6ZMY3 1216 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 CATSPERGQ6ZRH7 1159 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 CYP4X1Q8N118 509 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 TGS1Q96RS0 853 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 NCAPGQ9BPX3 1015 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 HOXC10Q9NYD6 342 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 ANKFY1Q9P2R3 1169 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 EFR3BQ9Y2G0 817 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 SIP14410 1827 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 FAM47DPA6NHR8 397 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 PRPF4O43172 522 aaKnown RBP eCLIP15.11■□□□□ 0.01
CD48-201ENST00000368045 ATP6V1G2O95670 118 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 CDH5P33151 784 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 HMGCS2P54868 508 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 VCPP55072 806 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 CCDC15Q0P6D6 951 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 BNIP1Q12981 228 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 MPP2Q14168 576 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 TARBP2Q15633 366 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 NBPF12Q5TAG4 269 aaPredicted RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 RNF43Q68DV7 783 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 CHST13Q8NET6 341 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 C9orf72Q96LT7 481 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 NIF3L1Q9GZT8 377 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 RXFP1Q9HBX9 757 aa15.11■□□□□ 0.01
CD48-201ENST00000368045 SMG5Q9UPR3 1016 aaKnown RBP15.11■□□□□ 0.01
CD48-201ENST00000368045 SHOC2Q9UQ13 582 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms