RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 APOA4P06727 396 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 PPHLN1Q8NEY8 458 aaKnown RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 REEP2Q9BRK0 252 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ERBB3P21860 1342 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 NFIBO00712 420 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ROR2Q01974 943 aaKnown RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ZNF844Q08AG5 666 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 KCTD2Q14681 263 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 BNC2Q6ZN30 1099 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 INPP5DQ92835 1189 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 RASSF9O75901 435 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 TNFRSF8P28908 595 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 SNAP25P60880 206 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 DEPDC1Q5TB30 811 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 TRIM69Q86WT6 500 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 CD302Q8IX05 232 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 EFCAB1Q9HAE3 211 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 HACD3Q9P035 362 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 CAB39Q9Y376 341 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 F5H423 210 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 KPNA4O00629 521 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ATP9BO43861 1147 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ALDH5A1P51649 535 aaPredicted RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 ADARP55265 1226 aaKnown RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 PPIDQ08752 370 aaKnown RBP16.42■□□□□ 0.22
FBXO28-201ENST00000366862 KRT72Q14CN4 511 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 LPCAT2Q7L5N7 544 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 RSAD1Q9HA92 442 aa16.42■□□□□ 0.22
FBXO28-201ENST00000366862 SAC3D1A6NKF1 404 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 GLRA3O75311 464 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 TNFAIP8O95379 198 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 DDR1Q08345 913 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 USP10Q14694 798 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 SUSD4Q5VX71 490 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 C2orf40Q9H1Z8 148 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 SAR1AQ9NR31 198 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 PCDHB2Q9Y5E7 798 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 MYO1DO94832 1006 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 PLEKHA7Q6IQ23 1121 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 PGM2Q96G03 612 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 EP400NLQ6ZTU2 488 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 RALAP11233 206 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 RPS6P62753 249 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 FOXD4Q12950 439 aaPredicted RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 PRKG1Q13976 671 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 LBRQ14739 615 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 SCFD1Q8WVM8 642 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 APBB2Q92870 758 aa16.41■□□□□ 0.22
FBXO28-201ENST00000366862 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 ATXN2Q99700 1313 aaKnown RBP16.41■□□□□ 0.22
FBXO28-201ENST00000366862 IQGAP3Q86VI3 1631 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 E5RI56 91 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 AP1G2O75843 785 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 RFC5P40937 340 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 TMC3Q7Z5M5 1100 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 STMN3Q9NZ72 180 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 MPP6Q9NZW5 540 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 ZMYND8Q9ULU4 1186 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 CFAP65Q6ZU64 1925 aaKnown RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 KANSL1LA0AUZ9 987 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 DGKIO75912 1065 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 ATP5BP06576 529 aaKnown RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 POLBP06746 335 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 PTENP60484 403 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 ZNF568Q3ZCX4 644 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 ILKAPQ9H0C8 392 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 THAP2Q9H0W7 228 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 EPS8L2Q9H6S3 715 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 TRIM45Q9H8W5 580 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 RGS2P41220 211 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 SH3GL1Q99961 368 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 DCDC2Q9UHG0 476 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 RAB14P61106 215 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 LUZP2Q86TE4 346 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 RNF217Q8TC41 542 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 CORO1CQ9ULV4 474 aaPredicted RBP16.4■□□□□ 0.22
FBXO28-201ENST00000366862 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
FBXO28-201ENST00000366862 TULP2O00295 520 aa16.39■□□□□ 0.22
FBXO28-201ENST00000366862 RIPK2O43353 540 aa16.39■□□□□ 0.22
FBXO28-201ENST00000366862 PRDX5P30044 214 aa16.39■□□□□ 0.22
FBXO28-201ENST00000366862 SCARF1Q14162 830 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms