RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC13A1Q9BZW2 595 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 TFR2Q9UP52 801 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 ANP32DO95626 131 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 INPP5AQ14642 412 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 FAM192AQ9GZU8 254 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 MDM1Q8TC05 714 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 CCDC195A0A1B0GUA6 201 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 IREB2P48200 963 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 TMEM139Q8IV31 216 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 RNF139Q8WU17 664 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 CDC42EP4Q9H3Q1 356 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 ARHGAP26Q9UNA1 814 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 CEP70Q8NHQ1 597 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 DCPSQ96C86 337 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 PCSK1NQ9UHG2 260 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 COPAP53621 1224 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 C16orf87Q6PH81 154 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 A8MXQ7 604 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 HUS1O60921 280 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 KRT4P19013 534 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ERVK-9P63128 1117 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 KDSRQ06136 332 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 SHOX2O60902 331 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 PDK1Q15118 436 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZNF720Q7Z2F6 126 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 C4orf33Q8N1A6 199 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 PCYOX1Q9UHG3 505 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 KCNN4O15554 427 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 RAD17O75943 681 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ABCE1P61221 599 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 PMS1P54277 932 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 SAR1AQ9NR31 198 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 BLOC1S6Q9UL45 172 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 NUDT17P0C025 328 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 MMP14P50281 582 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 CACNB3P54284 484 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 KIF2BQ8N4N8 673 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 RAB6BQ9NRW1 208 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 C15orf41Q9Y2V0 281 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 NCANO14594 1321 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ENO1P06733 434 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 PTPN4P29074 926 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 PACS2Q86VP3 889 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ATP6V1E2Q96A05 226 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 TNIP3Q96KP6 325 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ACAP3Q96P50 834 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 MMADHCQ9H3L0 296 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 BCL9O00512 1426 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 CUL2Q13617 745 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZC2HC1CQ53FD0 456 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 APOBEC3FQ8IUX4 373 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 GOLPH3Q9H4A6 298 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ADA2Q9NZK5 511 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 COL5A2P05997 1499 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 ILF2Q12905 390 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 NLRP9Q7RTR0 991 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
CDC42BPA-202ENST00000366764 A0A087X0B3 334 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 UBE2Q2LH0YL09 131 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 SORBS3O60504 671 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 RBP5P82980 135 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 LRRC55Q6ZSA7 311 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 JADE3Q92613 823 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 PCDH9Q9HC56 1237 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 SKIV2L2P42285 1042 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 SNAP25P60880 206 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 MED15Q96RN5 788 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 NFKBIAP25963 317 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 CYLC2Q14093 348 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 AASDHQ4L235 1098 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 PHTF1Q9UMS5 762 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 PIK3CDO00329 1044 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 TOMM70O94826 608 aa12.35□□□□□ -0.43
CDC42BPA-202ENST00000366764 ARHGDIAP52565 204 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms