RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SMYD3Q9H7B4 428 aa22.4■■□□□ 1.18
MAP1LC3A-201ENST00000360668 CAPN6Q9Y6Q1 641 aa22.4■■□□□ 1.18
MAP1LC3A-201ENST00000360668 PTGESO14684 152 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 URI1O94763 535 aaPredicted RBP22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 PNPLA4P41247 253 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 LRRC8DQ7L1W4 858 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 DNAAF5Q86Y56 855 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 PGBD4Q96DM1 585 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 ZNF560Q96MR9 790 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 SLC38A7Q9NVC3 462 aa22.39■■□□□ 1.18
MAP1LC3A-201ENST00000360668 THAP12O43422 761 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CALCAP01258 141 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PAEPP09466 180 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 LRPAP1P30533 357 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RAP1GAPP47736 663 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 NAP1L1P55209 391 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ACAD10Q6JQN1 1059 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 AGMOQ6ZNB7 445 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 FAM43BQ6ZT52 329 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RPS6KC1Q96S38 1066 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 UBN1Q9NPG3 1134 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SCN1AP35498 2009 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MEIS3P2A8K0S8 358 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PITPNM1O00562 1244 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PPEF2O14830 753 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 BUB1O43683 1085 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CILPO75339 1184 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CYP1A1P04798 512 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 UNGP13051 313 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MLH1P40692 756 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CDH8P55286 799 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 INCA1Q0VD86 236 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PPP1R2P3Q6NXS1 205 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GSTCDQ8NEC7 633 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ZNF606Q8WXB4 792 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RFFLQ8WZ73 363 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ZFP42Q96MM3 310 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RGS18Q9NS28 235 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RNF19AQ9NV58 838 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PCDHGC5Q9Y5F6 944 aa22.38■■□□□ 1.17
MAP1LC3A-201ENST00000360668 KIAA0100Q14667 2235 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TFRCP02786 760 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MNX1P50219 401 aaPredicted RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SOX4Q06945 474 aaPredicted RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TCEAL1Q15170 157 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 LPPQ93052 612 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CALR3Q96L12 384 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GAD1Q99259 594 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 THAP2Q9H0W7 228 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PDCL3Q9H2J4 239 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PUF60Q9UHX1 559 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 BARX2Q9UMQ3 279 aaPredicted RBP22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 JRKLQ9Y4A0 524 aa22.37■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ARL5CA6NH57 179 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 THP07101 528 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ABCB4P21439 1286 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RAD23BP54727 409 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GPC5P78333 572 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ZNF394Q53GI3 561 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SLC39A5Q6ZMH5 540 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ANKRD33Q7Z3H0 272 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ECHDC2Q86YB7 292 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 WHAMMQ8TF30 809 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MMS19Q96T76 1030 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 FTHL17Q9BXU8 183 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MYH10P35580 1976 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 NOP2P46087 812 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TAF6P49848 677 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CENPCQ03188 943 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SV2CQ496J9 727 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ZNF598Q86UK7 904 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 RHOT2Q8IXI1 618 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GDAP2Q9NXN4 497 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PCDHGC3Q9UN70 934 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SNX9Q9Y5X1 595 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MRFAP1Q9Y605 127 aa22.35■■□□□ 1.17
MAP1LC3A-201ENST00000360668 MED7O43513 233 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PQBP1O60828 265 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 LSM8O95777 96 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GJA8P48165 433 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TUBB4BP68371 445 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 NOMO3P69849 1222 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PAPD7Q5XG87 772 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SLC4A11Q8NBS3 891 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 SLC35G2Q8TBE7 412 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ARHGEF26Q96DR7 871 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 CYFIP2Q96F07 1278 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TRIM11Q96F44 468 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 TMEM176AQ96HP8 235 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ELOVL4Q9GZR5 314 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GOLGA2P5Q9HBQ8 144 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GTF3C4Q9UKN8 822 aa22.34■■□□□ 1.17
MAP1LC3A-201ENST00000360668 GRID2IPA4D2P6 1211 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 KPNA7A9QM74 516 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 C9IYK1 514 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 PALMO75781 387 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 EOMESO95936 686 aa22.33■■□□□ 1.17
MAP1LC3A-201ENST00000360668 ATP1A1P05023 1023 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms