RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MRPL4Q9BYD3 311 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 DPYSL4O14531 572 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 STX4Q12846 297 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 KNOP1Q1ED39 458 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 FRMD8Q9BZ67 464 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PHACTR1Q9C0D0 580 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 NEU2Q9Y3R4 380 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ATP7AQ04656 1500 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 KCNJ6P48051 423 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 CYP51A1Q16850 503 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 NDUFAF6Q330K2 333 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 TSPAN9O75954 239 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 PDE8BO95263 885 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ARL4DP49703 201 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 ATP1A4Q13733 1029 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 IARS2Q9NSE4 1012 aaKnown RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 VAV3Q9UKW4 847 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 A1BGP04217 495 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 HIST2H2ACQ16777 129 aaPredicted RBP9.7□□□□□ -0.86
VPS13A-203ENST00000360280 SUPT20HL1Q3ZLR7 823 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 HIST2H2AA3Q6FI13 130 aa9.7□□□□□ -0.86
VPS13A-203ENST00000360280 B2RBV5 119 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 JAK1P23458 1154 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PIGHQ14442 188 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 WDR36Q8NI36 951 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ROPN1BQ9BZX4 212 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ROPN1Q9HAT0 212 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SPACA6W5XKT8 324 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RALAP11233 206 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 EFCAB1Q9HAE3 211 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ARHGEF40Q8TER5 1519 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ABCC10Q5T3U5 1492 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 DDR2Q16832 855 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 LONRF1Q17RB8 773 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SUGP1Q8IWZ8 645 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PIGOQ8TEQ8 1089 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 EAF2Q96CJ1 260 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 OSBPL6Q9BZF3 934 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 GGT7Q9UJ14 662 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 MEI4A8MW99 385 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 TAF4O00268 1085 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 BCL10O95999 233 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 FRMD5Q7Z6J6 570 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RNFT2Q96EX2 444 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CD209Q9NNX6 404 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 TMEM120BA0PK00 339 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 STAT5AP42229 794 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 STAT5BP51692 787 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CNTN1Q12860 1018 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 LINC00523Q86TU6 105 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 REXO4Q9GZR2 422 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 AMACRQ9UHK6 382 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SNX12Q9UMY4 172 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RPS7P62081 194 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PIGSQ96S52 555 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 A8MXQ7 604 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CYBBP04839 570 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RXRGP48443 463 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CORO7P57737 925 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 HSMCR30P0CW71 290 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CCT3P49368 545 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PACSIN1Q9BY11 444 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 LEMD3Q9Y2U8 911 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 FHOD1Q9Y613 1164 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ADGRG1Q9Y653 693 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 UBN2Q6ZU65 1347 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ALDH1A2O94788 518 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SDE2Q6IQ49 451 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RAD54LQ92698 747 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SLC40A1Q9NP59 571 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 MTSS1O43312 755 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 TNFAIP8O95379 198 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 MAPK1P28482 360 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CDK17Q00537 523 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 COASYQ13057 564 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 EXD1Q8NHP7 514 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 PCCAP05165 728 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 CHI3L1P36222 383 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RESTQ13127 1097 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 USP10Q14694 798 aaKnown RBP9.69□□□□□ -0.86
VPS13A-203ENST00000360280 EDRF1Q3B7T1 1238 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ADCK2Q7Z695 626 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 TRIM51Q9BSJ1 452 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 ATP9BO43861 1147 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 RAD23AP54725 363 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SLC25A24Q6NUK1 477 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
VPS13A-203ENST00000360280 UBASH3BQ8TF42 649 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms