RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 TMEM161AQ9NX61 479 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 SCOCQ9UIL1 159 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 RGL2O15211 777 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 HLA-DRAP01903 254 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
NLRC3-202ENST00000359128 GCKP35557 465 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 TP53BP2Q13625 1128 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 PDK1Q15118 436 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 RABGAP1LQ5R372 815 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 C1orf146Q5VVC0 180 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 FAM47EQ6ZV65 393 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 CALML6Q8TD86 181 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
NLRC3-202ENST00000359128 DACH2Q96NX9 599 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 METTL5Q9NRN9 209 aaKnown RBP13.6□□□□□ -0.23
NLRC3-202ENST00000359128 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
NLRC3-202ENST00000359128 MMP14P50281 582 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
NLRC3-202ENST00000359128 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 CCDC90BQ9GZT6 254 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 CHST12Q9NRB3 414 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
NLRC3-202ENST00000359128 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 ANKEF1Q9NU02 776 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 C20orf96Q9NUD7 363 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 XPO7Q9UIA9 1087 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 SLC39A10Q9ULF5 831 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 CD163L1Q9NR16 1453 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 HEATR9A2RTY3 570 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 FAM47DPA6NHR8 397 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 ANGPT2O15123 496 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 AMHP03971 560 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 WEE2P0C1S8 567 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 MAP2K2P36507 400 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 FMO5P49326 533 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 CTXN3Q4LDR2 81 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 THG1LQ9NWX6 298 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 RASA1P20936 1047 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 DHX34Q14147 1143 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 UGP2Q16851 508 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 NBPF20Q3BBV1 942 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 MFSD1Q9H3U5 465 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 CAPN10Q9HC96 672 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 TMEM8AQ9HCN3 771 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 ADGRA2Q96PE1 1338 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 AMHR2Q16671 573 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 COL23A1Q86Y22 540 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 FBXO16Q8IX29 292 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 DSEQ9UL01 958 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 SPACA6W5XKT8 324 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 TECPR2O15040 1411 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 APRTP07741 180 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 CAP2P40123 477 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 RAP1GDS1P52306 607 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
NLRC3-202ENST00000359128 FAM32AQ9Y421 112 aaKnown RBP13.59□□□□□ -0.23
NLRC3-202ENST00000359128 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 RNF103-CHMP3A0A140T963 221 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 PGK2P07205 417 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 RAG1P15918 1043 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 CASP8Q14790 479 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 ECT2Q9H8V3 914 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 JMJD4Q9H9V9 463 aa13.58□□□□□ -0.23
NLRC3-202ENST00000359128 ANO9A1A5B4 782 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 FAM47E-STBD1D6RA91 191 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 NKRFO15226 690 aaKnown RBP eCLIP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 ARFIP2P53365 341 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 MTFR1Q15390 333 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 TMCO5AQ8N6Q1 288 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 BTN2A2Q8WVV5 523 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 EMILIN2Q9BXX0 1053 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 TMEM117Q9H0C3 514 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 WARS2Q9UGM6 360 aaKnown RBP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 LRRIQ3A6PVS8 624 aaPredicted RBP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 ATP5HO75947 161 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 HAUS5O94927 633 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 GLRA4Q5JXX5 417 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 ZNF438Q7Z4V0 828 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 ATL2Q8NHH9 583 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 TGS1Q96RS0 853 aaKnown RBP13.58□□□□□ -0.24
NLRC3-202ENST00000359128 DCTN4Q9UJW0 460 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 MYL4P12829 197 aa13.58□□□□□ -0.24
NLRC3-202ENST00000359128 CHRM3P20309 590 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms